RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MRPL4Q9BYD3 311 aaKnown RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 NIF3L1Q9GZT8 377 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 R3HDMLQ9H3Y0 253 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 HAUS2Q9NVX0 235 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 TBK1Q9UHD2 729 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 SNCAIPQ9Y6H5 919 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 PAPPA2Q9BXP8 1791 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 CALB1P05937 261 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 SRGAP2CP0DJJ0 459 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 GHRP10912 638 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ETS1P14921 441 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ATP5DP30049 168 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 VGLL4Q14135 290 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 PPP1R15BQ5SWA1 713 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 CYP4A22Q5TCH4 519 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 CDCA2Q69YH5 1023 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 GPAT2Q6NUI2 795 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 RELL1Q8IUW5 271 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 RCOR2Q8IZ40 523 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 LRRC71Q8N4P6 559 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 ZCCHC9Q8N567 271 aaKnown RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 WDTC1Q8N5D0 677 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 BBOF1Q8ND07 529 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 RBM41Q96IZ5 413 aaKnown RBP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 RBM15Q96T37 977 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLIP1-204ENST00000501271 EURLQ9NYK6 297 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 LGALS13Q9UHV8 139 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 CD2APQ9Y5K6 639 aa10.43□□□□□ -0.74
CLIP1-204ENST00000501271 EVPLQ92817 2033 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ZBTB42B2RXF5 422 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 TCP11X1B4DZS4 312 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 USP2O75604 605 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ARIH2O95376 493 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 LSM8O95777 96 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 OAS1P00973 400 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 PRKCBP05771 671 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 HOXC6P09630 235 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 WEE2P0C1S8 567 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 BRAFP15056 766 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 EFNA5P52803 228 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 AP3M2P53677 418 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 LAMTOR4Q0VGL1 99 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 GRM1Q13255 1194 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 NEDD9Q14511 834 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM63BQ5T3F8 832 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 CYP4F22Q6NT55 531 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 SPOCD1Q6ZMY3 1216 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 RIOX2Q8IUF8 465 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 RNF149Q8NC42 400 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 SEPT1Q8WYJ6 367 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 HAUS1Q96CS2 278 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 NSRP1Q9H0G5 558 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 KCNK9Q9NPC2 374 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 KLC4Q9NSK0 619 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 FGFR1OP2Q9NVK5 253 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 CPSF3Q9UKF6 684 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 NAALADL1Q9UQQ1 740 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 hCG_1818297A0A087WSY0 165 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 DNALI1O14645 258 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 OGTO15294 1046 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 SNX3O60493 162 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 MAGEA4P43358 317 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ASPAP45381 313 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 TFAMQ00059 246 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 MCL1Q07820 350 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ADCY1Q08828 1119 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 EAPPQ56P03 285 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 METTL7BQ6UX53 244 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 TAX1BP1Q86VP1 789 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 NCAPG2Q86XI2 1143 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 SRRM1Q8IYB3 904 aaKnown RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ALLCQ8N6M5 410 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 TMEM35BQ8NCS4 154 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 GDAP1Q8TB36 358 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF668Q96K58 619 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ABCF3Q9NUQ8 709 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLIP1-204ENST00000501271 GPRC5DQ9NZD1 345 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 ZNF148Q9UQR1 794 aa10.42□□□□□ -0.74
CLIP1-204ENST00000501271 CDH16O75309 829 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 TJP3O95049 919 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 GJB1P08034 283 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CDH5P33151 784 aaPredicted RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 CETN2P41208 172 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 PSMC4P43686 418 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 ARSEP51690 589 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 PDE4CQ08493 712 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 FASTKD3Q14CZ7 662 aaKnown RBP10.41□□□□□ -0.74
CLIP1-204ENST00000501271 DUOXA2Q1HG44 320 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 SGSM1Q2NKQ1 1148 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 HSDL1Q3SXM5 330 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 LRRC38Q5VT99 294 aa10.41□□□□□ -0.74
CLIP1-204ENST00000501271 IER5Q5VY09 327 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms