RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CPSF3	Q9UKF6	684 aa	Known RBP	11.55	□□□□□ -0.56
CDK11A-222	ENST00000498810	SCN1A	P35498	2009 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	PRR33	A8MZF0	331 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	CCL16	O15467	120 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	PRPF6	O94906	941 aa	Known RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	NFIC	P08651	508 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	RFX1	P22670	979 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	GUCY2F	P51841	1108 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	YWHAH	Q04917	246 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	PTPN21	Q16825	1174 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	RESP18	Q5W5W9	173 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	SUGP1	Q8IWZ8	645 aa	Known RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	ELMOD1	Q8N336	334 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	CCDC47	Q96A33	483 aa	Known RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	CCDC34	Q96HJ3	373 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	SUSD3	Q96L08	255 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	ZNF560	Q96MR9	790 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	FIZ1	Q96SL8	496 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	LRFN3	Q9BTN0	628 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	BLZF1	Q9H2G9	400 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	ASB7	Q9H672	318 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	EXOC1	Q9NV70	894 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	RBAK	Q9NYW8	714 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	KCNH3	Q9ULD8	1083 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	SORCS3	Q9UPU3	1222 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	UST	Q9Y2C2	406 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	DERA	Q9Y315	318 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	BACE2	Q9Y5Z0	518 aa		11.54	□□□□□ -0.56
CDK11A-222	ENST00000498810	FRMD3	A2A2Y4	597 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	GOLGA8IP	A6NC78	632 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	GOLGA6L4	A6NEF3	574 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	GOLGA8J	A6NMD2	632 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	GPR37L1	O60883	481 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	C1R	P00736	705 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	TMEM191B	P0C7N4	346 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	GART	P22102	1010 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	LRPAP1	P30533	357 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	CASP5	P51878	434 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	TFAM	Q00059	246 aa	Known RBP	11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	ROR1	Q01973	937 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	KCNA1	Q09470	495 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	RAB33A	Q14088	237 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	HS2ST1	Q7LGA3	356 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	METTL23	Q86XA0	190 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	LINC00528	Q8N1L1	170 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	EDA	Q92838	391 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	MFSD1	Q9H3U5	465 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	PCIF1	Q9H4Z3	704 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	CYP4F11	Q9HBI6	524 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	WDR6	Q9NNW5	1121 aa	Known RBP	11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	KBTBD4	Q9NVX7	518 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	C2CD2	Q9Y426	696 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	UBE4B	O95155	1302 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	DOCK8	Q8NF50	2099 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	MUC3A	Q02505	3323 aa		11.53	□□□□□ -0.56
CDK11A-222	ENST00000498810	DOCK6	Q96HP0	2047 aa		11.52	□□□□□ -0.56
CDK11A-222	ENST00000498810		A0A1B0GVL5	298 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	KIAA0391	O15091	583 aa	Known RBP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	EIF3D	O15371	548 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	ADAM12	O43184	909 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	FAM189A1	O60320	539 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	ASGR2	P07307	311 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	KRT19	P08727	400 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	PFKFB1	P16118	471 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	TAF6	P49848	677 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZXDA	P98168	799 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	SIGLEC14	Q08ET2	396 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	SV2C	Q496J9	727 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	C6orf118	Q5T5N4	469 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	SPATA1	Q5VX52	437 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	OVOS1	Q6IE37	1185 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	UNC13D	Q70J99	1090 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	BRSK2	Q8IWQ3	736 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	NELFCD	Q8IXH7	590 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZDHHC14	Q8IZN3	488 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	GPD1L	Q8N335	351 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	CACTIN	Q8WUQ7	758 aa	Known RBP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	LEO1	Q8WVC0	666 aa	Predicted RBP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	HPS3	Q969F9	1004 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	ANKRD36BP1	Q96IX9	119 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	MFSD14A	Q96MC6	490 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	IKZF4	Q9H2S9	585 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	DPP3	Q9NY33	737 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	SERTAD1	Q9UHV2	236 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	FBXL5	Q9UKA1	691 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	RCOR1	Q9UKL0	485 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	FBXL21	Q9UKT6	434 aa		11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.52	□□□□□ -0.57
CDK11A-222	ENST00000498810	WDR27	A2RRH5	827 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	TMEM221	A6NGB7	291 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	SOBP	A7XYQ1	873 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810		M0R296	226 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	MEFV	O15553	781 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	EXTL3	O43909	919 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	TNNC2	P02585	160 aa		11.51	□□□□□ -0.57

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