RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 SMARCAD1Q9H4L7 1026 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 ERAP1Q9NZ08 941 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 MRPS23Q9Y3D9 190 aaKnown RBP8.22□□□□□ -1.09
GARNL3-222ENST00000498801 PCDHA10Q9Y5I2 948 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 NRCAMQ92823 1304 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 COL1A2P08123 1366 aa8.22□□□□□ -1.09
GARNL3-222ENST00000498801 TCHHQ07283 1943 aa8.21□□□□□ -1.09
GARNL3-222ENST00000498801 TRBV23-1A0A0A0MS06 115 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 CCDC163A0A0D9SF12 145 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 A0A1W2PPC1 479 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 PP2D1A8MPX8 630 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 PPP1R12AO14974 1030 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 PRODHO43272 600 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 B4GALT4O60513 344 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 CUTAO60888 179 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 MYL3P08590 195 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 BMP8BP34820 402 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 CTSKP43235 329 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 PSMC6P62333 389 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 EPHA7Q15375 998 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 RSPO4Q2I0M5 234 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 KIAA0753Q2KHM9 967 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 UTP14CQ5TAP6 766 aaKnown RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 FAM160B1Q5W0V3 765 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 SWSAP1Q6NVH7 229 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 SERINC5Q86VE9 423 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 CCDC60Q8IWA6 550 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 ERMNQ8TAM6 284 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 NEK9Q8TD19 979 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 CLIC6Q96NY7 704 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 GBP4Q96PP9 640 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 GDF15Q99988 308 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 EIF2AK1Q9BQI3 630 aaKnown RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 IER2Q9BTL4 223 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 DUSP15Q9H1R2 295 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-222ENST00000498801 AZI2Q9H6S1 392 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 LRRC4CQ9HCJ2 640 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 ZNF302Q9NR11 478 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 GABBR1Q9UBS5 961 aa8.21□□□□□ -1.1
GARNL3-222ENST00000498801 TRIM43BA6NCK2 446 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 H0YGN5 161 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 PQBP1O60828 265 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 MED24O75448 989 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SLITRK3O94933 977 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 LYPLA2O95372 231 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 GSNP06396 782 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SMIM10L2AP0DMW4 78 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SMIM10L2BP0DMW5 78 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 PABPC1P11940 636 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 RPA1P27694 616 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CDC25AP30304 524 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CCT6AP40227 531 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 UBA7P41226 1012 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 QARSP47897 775 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 STAT5BP51692 787 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 PSMC5P62195 406 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 AMPD2Q01433 879 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 UGCGQ16739 394 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 TRIM71Q2Q1W2 868 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SPECC1Q5M775 1068 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CDKAL1Q5VV42 579 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 KRT79Q5XKE5 535 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 TAF2Q6P1X5 1199 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SHC4Q6S5L8 630 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CATSPER3Q86XQ3 398 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SCUBE1Q8IWY4 988 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 ZNF655Q8N720 491 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 CAGE1Q8TC20 777 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 ATP8B4Q8TF62 1192 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 LMBR1Q8WVP7 490 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 GLG1Q92896 1179 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 TRIM43Q96BQ3 446 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 DYDC2Q96IM9 177 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 EPSTI1Q96J88 318 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 FAM167AQ96KS9 214 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 HSD17B14Q9BPX1 270 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 SPOCK3Q9BQ16 436 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 LXNQ9BS40 222 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 MMTAG2Q9BU76 263 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 POLR3CQ9BUI4 534 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 NKX2-4Q9H2Z4 354 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 TRIT1Q9H3H1 467 aaKnown RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 TUFT1Q9NNX1 390 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 GPATCH2Q9NW75 528 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 RGL1Q9NZL6 768 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 PLAGL2Q9UPG8 496 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 ATP11BQ9Y2G3 1177 aa8.2□□□□□ -1.1
GARNL3-222ENST00000498801 GPR55Q9Y2T6 319 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-222ENST00000498801 LTBP2Q14767 1821 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 A0A1W2PQ27 194 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 A0A1W2PQ64 194 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 A0A1W2PQD8 194 aa8.19□□□□□ -1.1
GARNL3-222ENST00000498801 GOLGA6L4A6NEF3 574 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms