RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 OR10T2Q8NGX3 314 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 ELMO3Q96BJ8 720 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 TMEM209Q96SK2 561 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 RTP3Q9BQQ7 232 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 XYLT2Q9H1B5 865 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 ADAM7Q9H2U9 754 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 NXF1Q9UBU9 619 aaKnown RBP17.99■□□□□ 0.47
PRKCB-210ENST00000498739 CDH22Q9UJ99 828 aa17.99■□□□□ 0.47
PRKCB-210ENST00000498739 ZMYND10O75800 440 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 ABLIM3O94929 683 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 FGFR1OPO95684 399 aaKnown RBP17.98■□□□□ 0.47
PRKCB-210ENST00000498739 WEE2P0C1S8 567 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 BMP1P13497 986 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 ATF2P15336 505 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 ELF1P32519 619 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 GTF2H1P32780 548 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 MXI1P50539 228 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 MCCD1P59942 119 aaPredicted RBP17.98■□□□□ 0.47
PRKCB-210ENST00000498739 MYL7Q01449 175 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 TPD52L1Q16890 204 aaPredicted RBP17.98■□□□□ 0.47
PRKCB-210ENST00000498739 SGSM1Q2NKQ1 1148 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 ZNF667Q5HYK9 610 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 PPM1LQ5SGD2 360 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 TPGS2Q68CL5 300 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 CAVIN1Q6NZI2 390 aaKnown RBP17.98■□□□□ 0.47
PRKCB-210ENST00000498739 RNF19BQ6ZMZ0 732 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 OSTM1Q86WC4 334 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 SLC7A14Q8TBB6 771 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 FEZF2Q8TBJ5 459 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 TAS1R2Q8TE23 839 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 PGLYRP2Q96PD5 576 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 MED15Q96RN5 788 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 ZDHHC7Q9NXF8 308 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 DDX43Q9NXZ2 648 aaKnown RBP17.98■□□□□ 0.47
PRKCB-210ENST00000498739 POLIQ9UNA4 740 aa17.98■□□□□ 0.47
PRKCB-210ENST00000498739 CCDC195A0A1B0GUA6 201 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 PRRG1O14668 218 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 GNA14O95837 355 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 PTMSP20962 102 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 ERCC5P28715 1186 aaPredicted RBP17.97■□□□□ 0.47
PRKCB-210ENST00000498739 LHX1P48742 406 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 ADCY1Q08828 1119 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 GPR17Q13304 367 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 SMAD2Q15796 467 aaKnown RBP17.97■□□□□ 0.47
PRKCB-210ENST00000498739 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 TAF4BQ92750 862 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 SLC35C1Q96A29 364 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 IMPG2Q9BZV3 1241 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 ZCWPW1Q9H0M4 648 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 VRTNQ9H8Y1 702 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 CYP4F11Q9HBI6 524 aa17.97■□□□□ 0.47
PRKCB-210ENST00000498739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.478e-7■■■■■ 71.7
PRKCB-210ENST00000498739 AFF4Q9UHB7 1163 aaKnown RBP17.97■□□□□ 0.47
PRKCB-210ENST00000498739 PRUNE2Q8WUY3 3088 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 SEC24AO95486 1093 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 ASS1P00966 412 aaKnown RBP17.96■□□□□ 0.47
PRKCB-210ENST00000498739 ACAT1P24752 427 aaKnown RBP17.96■□□□□ 0.47
PRKCB-210ENST00000498739 TSPY1Q01534 308 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CBX2Q14781 532 aaPredicted RBP17.96■□□□□ 0.47
PRKCB-210ENST00000498739 UVSSAQ2YD98 709 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CBWD6Q4V339 395 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 SLC39A12Q504Y0 691 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CBWD3Q5JTY5 395 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CBWD5Q5RIA9 395 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 SPOPLQ6IQ16 392 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 SCARA5Q6ZMJ2 495 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 LIMS2Q7Z4I7 341 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 GPR149Q86SP6 731 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CCDC150Q8NCX0 1101 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 CMASQ8NFW8 434 aaPredicted RBP17.96■□□□□ 0.47
PRKCB-210ENST00000498739 KBTBD7Q8WVZ9 684 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 SUSD6Q92537 303 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 RIPOR3Q96MK2 946 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 MRPL45Q9BRJ2 306 aaKnown RBP17.96■□□□□ 0.47
PRKCB-210ENST00000498739 PI4K2AQ9BTU6 479 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 PIDD1Q9HB75 910 aa17.96■□□□□ 0.47
PRKCB-210ENST00000498739 MTMR11A4FU01 709 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 GABRDO14764 452 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 HCRTO43612 131 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 TACC1O75410 805 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 CCDC192P0DO97 292 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 P4HA1P13674 534 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 WARSP23381 471 aaKnown RBP17.95■□□□□ 0.46
PRKCB-210ENST00000498739 MTHFRP42898 656 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 RAP1GAPP47736 663 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 CDR1P51861 262 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 STX1AQ16623 288 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 KLHL40Q2TBA0 621 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 ATAT1Q5SQI0 421 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 DCP1BQ8IZD4 617 aaKnown RBP17.95■□□□□ 0.46
PRKCB-210ENST00000498739 FBXL13Q8NEE6 735 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 OR6B3Q8NGW1 331 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 SMG7Q92540 1137 aaKnown RBP17.95■□□□□ 0.46
PRKCB-210ENST00000498739 ZNF707Q96C28 371 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-210ENST00000498739 CNOT6LQ96LI5 555 aaKnown RBP17.95■□□□□ 0.46
PRKCB-210ENST00000498739 ACBD6Q9BR61 282 aa17.95■□□□□ 0.46
PRKCB-210ENST00000498739 PRKD2Q9BZL6 878 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms