RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 DLGAP5Q15398 846 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 ZNF827Q17R98 1081 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 SMARCC2Q8TAQ2 1214 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 ADAMTS18Q8TE60 1221 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 GORASP1Q9BQQ3 440 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 SEPSECSQ9HD40 501 aaKnown RBP9.45□□□□□ -0.9
SNX13-212ENST00000498463 PRDM8Q9NQV8 689 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 AASSQ9UDR5 926 aa9.45□□□□□ -0.9
SNX13-212ENST00000498463 SETD1BQ9UPS6 1966 aaKnown RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 C2orf78A6NCI8 922 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 RAB27BO00194 218 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 ACVR2AP27037 513 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 SLC6A4P31645 630 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 ETV4P43268 484 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 CCR5P51681 352 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 DCAF7P61962 342 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 PSMC1P62191 440 aaKnown RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 VAMP2P63027 116 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 UBE3AQ05086 875 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 TOP3AQ13472 1001 aaPredicted RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 PLCL1Q15111 1095 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 CCDC96Q2M329 555 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 TRIM68Q6AZZ1 485 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 OTUD7BQ6GQQ9 843 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 NEK10Q6ZWH5 1172 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 CCDC117Q8IWD4 279 aaPredicted RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 RTKN2Q8IZC4 609 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 MS4A7Q9GZW8 240 aaPredicted RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 SLC6A17Q9H1V8 727 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 SMYD2Q9NRG4 433 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 OLA1Q9NTK5 396 aaKnown RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 TMEM160Q9NX00 188 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 ZMYND8Q9ULU4 1186 aaPredicted RBP9.44□□□□□ -0.9
SNX13-212ENST00000498463 JAG2Q9Y219 1238 aa9.44□□□□□ -0.9
SNX13-212ENST00000498463 TCRBV7S2A1N4TA0A589 114 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
SNX13-212ENST00000498463 USP1O94782 785 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 INMTO95050 263 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 CKBP12277 381 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 AP2B1P63010 937 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 MXRA7P84157 204 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 SLC29A2Q14542 456 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 RSPO4Q2I0M5 234 aaPredicted RBP9.43□□□□□ -0.9
SNX13-212ENST00000498463 MFSD14BQ5SR56 506 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 RAP1GAP2Q684P5 730 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 OLFML2BQ68BL8 750 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 SEM1Q6ZVN7 128 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 CCDC28AQ8IWP9 274 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 NUP133Q8WUM0 1156 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 RTKNQ9BST9 563 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 PCDH18Q9HCL0 1135 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 JKAMPQ9P055 326 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 LPAR3Q9UBY5 353 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
SNX13-212ENST00000498463 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 F5H0A9 414 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 DYRK3O43781 588 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 TMCC2O75069 709 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 TOX4O94842 621 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 RNASE1P07998 156 aaKnown RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 PECAM1P16284 738 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 SLC12A1Q13621 1099 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 SLC5A9Q2M3M2 681 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 KRT73Q86Y46 540 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 PDSS2Q86YH6 399 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 SLC44A2Q8IWA5 706 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 TSPYL6Q8N831 410 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 SCAMP5Q8TAC9 235 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 CEP95Q96GE4 821 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 COG8Q96MW5 612 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 TINAGL1Q9GZM7 467 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 TAF1DQ9H5J8 278 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 SLC45A2Q9UMX9 530 aa9.42□□□□□ -0.9
SNX13-212ENST00000498463 CTDP1Q9Y5B0 961 aaPredicted RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 RBM8AQ9Y5S9 174 aaKnown RBP9.42□□□□□ -0.9
SNX13-212ENST00000498463 A0A087X0M5 115 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 A0A1B0GX30 115 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 PCDH17O14917 1159 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 GLP2RO95838 553 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 TK1P04183 234 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 PIM1P11309 404 aaPredicted RBP9.41□□□□□ -0.9
SNX13-212ENST00000498463 ATP5JP18859 108 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 VIPR1P32241 457 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
SNX13-212ENST00000498463 ACTR2P61160 394 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 CRB2Q5IJ48 1285 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.41□□□□□ -0.9
SNX13-212ENST00000498463 FAM47AQ5JRC9 791 aa9.41□□□□□ -0.9
SNX13-212ENST00000498463 LARP4Q71RC2 724 aaKnown RBP eCLIP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms