RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 TRIML1Q8N9V2 468 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 PLEKHO2Q8TD55 490 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 ZNF516Q92618 1163 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-234ENST00000497758 ZNF707Q96C28 371 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-234ENST00000497758 EEF2KMTQ96G04 330 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 PGLYRP2Q96PD5 576 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 RHOBTB2Q9BYZ6 727 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-234ENST00000497758 NUP62CLQ9H1M0 184 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 KIAA1468Q9P260 1216 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
MRPL55-234ENST00000497758 TRIM49BA6NDI0 452 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
MRPL55-234ENST00000497758 STX10O60499 249 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 TRIM49P0CI25 452 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 TRIM49CP0CI26 452 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 PCSK1P29120 753 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 ATICP31939 592 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 PIK3CAP42336 1068 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 LHX1P48742 406 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 MYL6P60660 151 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 DLG4P78352 724 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 MYL7Q01449 175 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 ENPEPQ07075 957 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 ZNF699Q32M78 642 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 DCP1BQ8IZD4 617 aaKnown RBP12.6□□□□□ -0.39
MRPL55-234ENST00000497758 ELMOD1Q8N336 334 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
MRPL55-234ENST00000497758 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 ACSF2Q96CM8 615 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-234ENST00000497758 WDR6Q9NNW5 1121 aaKnown RBP12.6□□□□□ -0.39
MRPL55-234ENST00000497758 CTNND2Q9UQB3 1225 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 INSL5Q9Y5Q6 135 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 CLUHO75153 1309 aa12.6□□□□□ -0.39
MRPL55-234ENST00000497758 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 SEC24AO95486 1093 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 POU2F2P09086 479 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 P4HA1P13674 534 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 BMP6P22004 513 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 PMS1P54277 932 aaKnown RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 SMARCB1Q12824 385 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 PAK1Q13153 545 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 PLD1Q13393 1074 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 DPH6Q7L8W6 267 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 GRASPQ7Z6J2 395 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 RTP3Q9BQQ7 232 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 IMPG2Q9BZV3 1241 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 MMRN2Q9H8L6 949 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 CD320Q9NPF0 282 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 DDX43Q9NXZ2 648 aaKnown RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 NXF1Q9UBU9 619 aaKnown RBP12.59□□□□□ -0.39
MRPL55-234ENST00000497758 USTQ9Y2C2 406 aa12.59□□□□□ -0.39
MRPL55-234ENST00000497758 MTMR11A4FU01 709 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 PPP1R3GB7ZBB8 358 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 PAPLNO95428 1278 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 STAU1O95793 577 aaKnown RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 C4BPAP04003 597 aaKnown RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 FSHRP23945 695 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 GBP2P32456 591 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 GTF2H1P32780 548 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ALDH1A3P47895 512 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 GCLMP48507 274 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 TWF1Q12792 350 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 DUSP4Q13115 394 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 NFE2Q16621 373 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 SGSM1Q2NKQ1 1148 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ZACNQ401N2 412 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 CCDC40Q4G0X9 1142 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 DCAF17Q5H9S7 520 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ZNF667Q5HYK9 610 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 TCERG1LQ5VWI1 586 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 SV2AQ7L0J3 742 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 GET4Q7L5D6 327 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 ATAD1Q8NBU5 361 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
MRPL55-234ENST00000497758 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
MRPL55-234ENST00000497758 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms