RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 PLCB3Q01970 1234 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 RAB30Q15771 203 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 FAM171A1Q5VUB5 890 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 ADGRF2Q8IZF7 708 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 SPATA18Q8TC71 538 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 C17orf80Q9BSJ5 609 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 PLVAPQ9BX97 442 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 MYO6Q9UM54 1294 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 LUC7L2Q9Y383 392 aaKnown RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 NME7Q9Y5B8 376 aa14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 TIMM13Q9Y5L4 95 aaPredicted RBP14.92□□□□□ -0.02
ATPAF2-208ENST00000496852 PLXNA3P51805 1871 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 MFAP3LO75121 409 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 CILPO75339 1184 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 FGF18O76093 207 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 PNMA6AP0CW24 399 aaPredicted RBP14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 CTNNB1P35222 781 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 ADKP55263 362 aaKnown RBP14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 TAP1Q03518 808 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 ARID5BQ14865 1188 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 PDXDC1Q6P996 788 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 DDX53Q86TM3 631 aaKnown RBP14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 OSTM1Q86WC4 334 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 FAM71AQ8IYT1 594 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 TTC39CQ8N584 583 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 KLHL23Q8NBE8 558 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 WHAMMQ8TF30 809 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 SAMD11Q96NU1 681 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 MSRAQ9UJ68 235 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 DSEQ9UL01 958 aa14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
ATPAF2-208ENST00000496852 A0A1W2PPC1 479 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 AKR1B15C9JRZ8 316 aaPredicted RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 SOD2P04179 222 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 KRT9P35527 623 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 SOX5P35711 763 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 GSDMDP57764 484 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 ERVK-21P61565 698 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 TMEM270Q6UE05 265 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 TAS1R1Q7RTX1 841 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 TC2NQ8N9U0 490 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 ZNF397Q8NF99 534 aaPredicted RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 NKX2-4Q9H2Z4 354 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 CHST7Q9NS84 486 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 HMGXB4Q9UGU5 601 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 PCDHB4Q9Y5E5 795 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 OAZ2O95190 189 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 RB1P06400 928 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 STAT1P42224 750 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 LHX1P48742 406 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 ZNF132P52740 706 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 NDST1P52848 882 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 SMAD3P84022 425 aaKnown RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 MRPL58Q14197 206 aaKnown RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 USP41Q3LFD5 358 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 RTP2Q5QGT7 225 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 UNC93AQ86WB7 457 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 CNGA4Q8IV77 575 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 OR6B3Q8NGW1 331 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 ZNF830Q96NB3 372 aaPredicted RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 DNAJC7Q99615 494 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 RTP3Q9BQQ7 232 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 ELOVL4Q9GZR5 314 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 NUCKS1Q9H1E3 243 aaKnown RBP14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
ATPAF2-208ENST00000496852 HCRTO43612 131 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 KRT5P13647 590 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 DNAJB2P25686 324 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 LMO2P25791 158 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 CLCN1P35523 988 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 GNL1P36915 607 aaPredicted RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 RAD23BP54727 409 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 KRT17Q04695 432 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 YWHAHQ04917 246 aaPredicted RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 TSR1Q2NL82 804 aaKnown RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 ZNF394Q53GI3 561 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 VARS2Q5ST30 1063 aaKnown RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 OVOS1Q6IE37 1185 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 METTL23Q86XA0 190 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 RBBP8NLQ8NC74 664 aaPredicted RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 SYN2Q92777 582 aaPredicted RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 TTPALQ9BTX7 342 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 ABHD10Q9NUJ1 306 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 DDX43Q9NXZ2 648 aaKnown RBP14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 AIPL1Q9NZN9 384 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 STK39Q9UEW8 545 aa14.89□□□□□ -0.03
ATPAF2-208ENST00000496852 GREB1Q4ZG55 1949 aa14.88□□□□□ -0.03
ATPAF2-208ENST00000496852 A8MXQ7 604 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms