RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
ATG3-209ENST00000496423 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 DNAAF2Q9NVR5 837 aaKnown RBP12.81□□□□□ -0.36
ATG3-209ENST00000496423 DDX25Q9UHL0 483 aaKnown RBP12.81□□□□□ -0.36
ATG3-209ENST00000496423 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 ASXL3Q9C0F0 2248 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 ARID2Q68CP9 1835 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 PODXLO00592 558 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 SGSM2O43147 1006 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 PRPF3O43395 683 aaKnown RBP12.8□□□□□ -0.36
ATG3-209ENST00000496423 SH3BP5O60239 455 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 NTRK1P04629 796 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 GLRA2P23416 452 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 P2RY2P41231 377 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 NLRP5P59047 1200 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 NUCB1Q02818 461 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 CFHR1Q03591 330 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 VEPH1Q14D04 833 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 GLRA4Q5JXX5 417 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 CD300LGQ6UXG3 332 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 GAREM2Q75VX8 874 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 TMPRSS7Q7RTY8 843 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 NAXDQ8IW45 347 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 TPH2Q8IWU9 490 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
ATG3-209ENST00000496423 PSMG2Q969U7 264 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 FZD8Q9H461 694 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 FBRSL1Q9HCM7 1045 aaKnown RBP12.8□□□□□ -0.36
ATG3-209ENST00000496423 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 XPNPEP1Q9NQW7 623 aa12.8□□□□□ -0.36
ATG3-209ENST00000496423 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
ATG3-209ENST00000496423 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
ATG3-209ENST00000496423 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 SMIM28A0A1B0GU29 152 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 TRABD2BA6NFA1 517 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 E9PAM4 449 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 ADAMTS3O15072 1205 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
ATG3-209ENST00000496423 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 TDP2O95551 362 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 MCM4P33991 863 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 GJA4P35212 333 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 PTGER3P43115 390 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 DUSP4Q13115 394 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
ATG3-209ENST00000496423 SLC36A4Q6YBV0 504 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 GLRX5Q86SX6 157 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 DDX12PQ92771 950 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 CHFRQ96EP1 664 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
ATG3-209ENST00000496423 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 ANKEF1Q9NU02 776 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 TBX20Q9UMR3 447 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 PTPRBP23467 1997 aa12.79□□□□□ -0.36
ATG3-209ENST00000496423 TNRC6BQ9UPQ9 1833 aaKnown RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 TRIP11Q15643 1979 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 TENM4Q6N022 2769 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 TEX51A0A1B0GUA7 166 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 ACKR2O00590 384 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 EDIL3O43854 480 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 ITPKAP23677 461 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.36
ATG3-209ENST00000496423 CDC27P30260 824 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 NBR1Q14596 966 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 CRY1Q16526 586 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 TRIM68Q6AZZ1 485 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 USP37Q86T82 979 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 CRELD1Q96HD1 420 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 DYDC2Q96IM9 177 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 CAMK1GQ96NX5 476 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 CXCL16Q9H2A7 254 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 CAPN10Q9HC96 672 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 WRAP73Q9P2S5 460 aaPredicted RBP12.78□□□□□ -0.36
ATG3-209ENST00000496423 BRPF3Q9ULD4 1205 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
ATG3-209ENST00000496423 OR6C75A6NL08 312 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 SLC27A2O14975 620 aa12.77□□□□□ -0.37
ATG3-209ENST00000496423 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
ATG3-209ENST00000496423 GPR17Q13304 367 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms