RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ERAP1Q9NZ08 941 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 ANAPC5Q9UJX4 755 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 TNFSF13BQ9Y275 285 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 O00370 1275 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 MED7O43513 233 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 IVDP26440 423 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 COPS2P61201 443 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 MFSD5Q6N075 450 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 GSTA5Q7RTV2 222 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 EPS8L3Q8TE67 593 aaKnown RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 NFKBIZQ9BYH8 718 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 PRMT7Q9NVM4 692 aaPredicted RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 TP73O15350 636 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 GJB6O95452 261 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 ASPAP45381 313 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 OSTNP61366 133 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 ERMARDQ5T6L9 678 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 SCARA3Q6AZY7 606 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 OTUD6BQ8N6M0 293 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 TRAPPC12Q8WVT3 735 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 CDCA5Q96FF9 252 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 SLITRK1Q96PX8 696 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 DDX56Q9NY93 547 aaKnown RBP11.72□□□□□ -0.53
CMSS1-208ENST00000496116 RNF181Q9P0P0 153 aa11.72□□□□□ -0.53
CMSS1-208ENST00000496116 MCM3APO60318 1980 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 TCRBV5S1A1TA0A578 114 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 ACSL3O95573 720 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 TTC4O95801 387 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 KRT1P04264 644 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 KRT19P08727 400 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 CHN1P15882 459 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.53
CMSS1-208ENST00000496116 PHKA2P46019 1235 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 CLCN3P51790 818 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 TNFAIP2Q03169 654 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 POU5F1BQ06416 359 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 AUHQ13825 339 aaKnown RBP11.71□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF667Q5HYK9 610 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF484Q5JVG2 852 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 CPLX4Q7Z7G2 160 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 NIPA2Q8N8Q9 360 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 COPS5Q92905 334 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 SERPINB12Q96P63 405 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 XPO6Q96QU8 1125 aaKnown RBP11.71□□□□□ -0.53
CMSS1-208ENST00000496116 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 XYLT2Q9H1B5 865 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 ANK1P16157 1881 aa11.71□□□□□ -0.53
CMSS1-208ENST00000496116 NDC80O14777 642 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 B4GALT5O43286 388 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 CHKAP35790 457 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 VPS41P49754 854 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 IFI35P80217 286 aaPredicted RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 PPARDQ03181 441 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 SLC20A2Q08357 652 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 TNFAIP8L3Q5GJ75 292 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 TFDP3Q5H9I0 405 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 KAZNQ674X7 775 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 MDM1Q8TC05 714 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 GTF3C2Q8WUA4 911 aaPredicted RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 CDT1Q9H211 546 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 LHX5Q9H2C1 402 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 INTS9Q9NV88 658 aaKnown RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.54
CMSS1-208ENST00000496116 PNMA3Q9UL41 463 aa11.71□□□□□ -0.54
CMSS1-208ENST00000496116 C5orf60A6NFR6 353 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 F8VP50 259 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 MAGEB2O15479 319 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 LIASO43766 372 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 GJB1P08034 283 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 CXCL8P10145 99 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 CD19P15391 556 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 PTPN7P35236 360 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 MOGSQ13724 837 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 LAMC2Q13753 1193 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 KYAT1Q16773 422 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 FAM187BQ17R55 369 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
CMSS1-208ENST00000496116 GKAP1Q5VSY0 366 aaPredicted RBP11.7□□□□□ -0.54
CMSS1-208ENST00000496116 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms