RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CA14Q9ULX7 337 aa26.11■■□□□ 1.77
HLA-C-209ENST00000495835 MYL1P05976 194 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 TMEM191BP0C7N4 346 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 POLR2BP30876 1174 aaKnown RBP26.1■■□□□ 1.77
HLA-C-209ENST00000495835 CCR2P41597 374 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 STARD6P59095 220 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 PRKCQQ04759 706 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 BMT2Q1RMZ1 405 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 WSCD1Q658N2 575 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 ITIH5Q86UX2 942 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 DCP1BQ8IZD4 617 aaKnown RBP26.1■■□□□ 1.77
HLA-C-209ENST00000495835 TMEM86AQ8N2M4 240 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 CSGALNACT2Q8N6G5 542 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 ATAD1Q8NBU5 361 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 TCEAL4Q96EI5 215 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 CRISPLD1Q9H336 500 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 INTS13Q9NVM9 706 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 R3HCC1Q9Y3T6 440 aaKnown RBP26.1■■□□□ 1.77
HLA-C-209ENST00000495835 CACNA1HO95180 2353 aa26.1■■□□□ 1.77
HLA-C-209ENST00000495835 STK25O00506 426 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 TGFB1I1O43294 461 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 HUS1O60921 280 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 RFX1P22670 979 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 DUOXA2Q1HG44 320 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 SLC39A12Q504Y0 691 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 DPH6Q7L8W6 267 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 HS2ST1Q7LGA3 356 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 C12orf56Q8IXR9 622 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 CCDC105Q8IYK2 499 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 HS6ST3Q8IZP7 471 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 LEO1Q8WVC0 666 aaPredicted RBP26.09■■□□□ 1.77
HLA-C-209ENST00000495835 SCFD1Q8WVM8 642 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 PSMG2Q969U7 264 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 SPATA32Q96LK8 384 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 ASB16Q96NS5 453 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 TMEM209Q96SK2 561 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 LRRC3Q9BY71 257 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 DNAJC25Q9H1X3 360 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 TBC1D17Q9HA65 648 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 TRPV4Q9HBA0 871 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 ZFP14Q9HCL3 533 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 AGPAT3Q9NRZ7 376 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 ZDHHC9Q9Y397 364 aa26.09■■□□□ 1.77
HLA-C-209ENST00000495835 PI15O43692 258 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 MOSPD3O75425 235 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 AFMP43652 599 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 PSMD2Q13200 908 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 CUL4BQ13620 913 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 WDR49Q8IV35 697 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 NOC3LQ8WTT2 800 aaKnown RBP26.08■■□□□ 1.77
HLA-C-209ENST00000495835 SMARCD2Q92925 531 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 E2F7Q96AV8 911 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 KXD1Q9BQD3 176 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 ACBD6Q9BR61 282 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 BLZF1Q9H2G9 400 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 SLC27A5Q9Y2P5 690 aa26.08■■□□□ 1.77
HLA-C-209ENST00000495835 ACTN4O43707 911 aaKnown RBP26.07■■□□□ 1.76
HLA-C-209ENST00000495835 PRPF40AO75400 957 aaKnown RBP26.07■■□□□ 1.76
HLA-C-209ENST00000495835 TNNC2P02585 160 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 MYL4P12829 197 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 TSPY1Q01534 308 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 MYO1EQ12965 1108 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 NFE2Q16621 373 aaPredicted RBP26.07■■□□□ 1.76
HLA-C-209ENST00000495835 TANGO2Q6ICL3 276 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 POTEHQ6S545 545 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 TMC8Q8IU68 726 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 CBWD2Q8IUF1 395 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 TOP6BLQ8N6T0 577 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 XXYLT1Q8NBI6 393 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 SCAND2PQ9GZW5 306 aaPredicted RBP26.07■■□□□ 1.76
HLA-C-209ENST00000495835 SERTAD1Q9UHV2 236 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 HPSEQ9Y251 543 aa26.07■■□□□ 1.76
HLA-C-209ENST00000495835 FAM237AA0A1B0GTK4 181 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 FCARP24071 287 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 LHX1P48742 406 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 MRE11P49959 708 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 SNRNP35Q16560 246 aaKnown RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 KNOP1Q1ED39 458 aaKnown RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 SLC44A4Q53GD3 710 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 FAM78AQ5JUQ0 283 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 DNAJB7Q7Z6W7 309 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 ALYREFQ86V81 257 aaKnown RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 PDCL2Q8N4E4 241 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 ST13P5Q8NFI4 369 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 GOLGA5Q8TBA6 731 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 TMEM174Q8WUU8 243 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 ATOH1Q92858 354 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 DNASE1L2Q92874 299 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 DDX23Q9BUQ8 820 aaKnown RBP26.06■■□□□ 1.76
HLA-C-209ENST00000495835 OSBPL6Q9BZF3 934 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 MTMR12Q9C0I1 747 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 SIX4Q9UIU6 781 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 SIT1Q9Y3P8 196 aa26.06■■□□□ 1.76
HLA-C-209ENST00000495835 KRT19P08727 400 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 PFKFB1P16118 471 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 CASP1P29466 404 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 MYL7Q01449 175 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 VEPH1Q14D04 833 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 LRRTM3Q86VH5 581 aa26.05■■□□□ 1.76
HLA-C-209ENST00000495835 DTWD2Q8NBA8 298 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms