RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.785e-7■■■■■ 163.7
ACTN4-207ENST00000495553 CACNG4Q9UBN1 327 aa10.15□□□□□ -0.78
ACTN4-207ENST00000495553 SIX4Q9UIU6 781 aa10.15□□□□□ -0.78
ACTN4-207ENST00000495553 ADAM28Q9UKQ2 775 aa10.15□□□□□ -0.78
ACTN4-207ENST00000495553 SNX9Q9Y5X1 595 aa10.15□□□□□ -0.78
ACTN4-207ENST00000495553 ANK1P16157 1881 aa10.15□□□□□ -0.79
ACTN4-207ENST00000495553 SF3B1O75533 1304 aaKnown RBP eCLIP10.14□□□□□ -0.791e-7■■■■■ 71.2
ACTN4-207ENST00000495553 F8W810 466 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TMEM189-UBE2V1I3L0A0 370 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 CYB561D2O14569 222 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 MFAP3LO75121 409 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 CXCL14O95715 111 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 GYPCP04921 128 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 URODP06132 367 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 FAM163BP0C2L3 166 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 FERP16591 822 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 CASP14P31944 242 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 IRS1P35568 1242 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 KLK7P49862 253 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 LILRA4P59901 499 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 SOX4Q06945 474 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 CAMK1Q14012 370 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 DRAP1Q14919 205 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 NAB2Q15742 525 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 ASIC2Q16515 512 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TCEAL5Q5H9L2 206 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 IQCEQ6IPM2 695 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 FUT10Q6P4F1 479 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 SCARA5Q6ZMJ2 495 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 VPS36Q86VN1 386 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TMEM86AQ8N2M4 240 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TOP6BLQ8N6T0 577 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 CCDC112Q8NEF3 446 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 LMO3Q8TAP4 145 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 HASPINQ8TF76 798 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 SYN2Q92777 582 aaPredicted RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 PANX2Q96RD6 677 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 NAA15Q9BXJ9 866 aaKnown RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 XYLT2Q9H1B5 865 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 GANQ9H2C0 597 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TLE6Q9H808 572 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 GOLGA2P5Q9HBQ8 144 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 MRPL17Q9NRX2 175 aaKnown RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 MARCH5Q9NX47 278 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 GDAP2Q9NXN4 497 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 PCDHB4Q9Y5E5 795 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 BZW2Q9Y6E2 419 aaKnown RBP10.14□□□□□ -0.79
ACTN4-207ENST00000495553 MYO9BQ13459 2157 aa10.14□□□□□ -0.79
ACTN4-207ENST00000495553 TDRD15B5MCY1 1934 aaKnown RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 F8VZ95 297 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 C2CD2LO14523 706 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 FSCN2O14926 492 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 NCK2O43639 380 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 IPO7O95373 1038 aaKnown RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 SOD2P04179 222 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 CTSAP10619 480 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 SOX5P35711 763 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 LHX1P48742 406 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PTK2Q05397 1052 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 TBX2Q13207 712 aaPredicted RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PTPN21Q16825 1174 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 USP41Q3LFD5 358 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 SPOPLQ6IQ16 392 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 EP400NLQ6ZTU2 488 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 RBM23Q86U06 439 aaKnown RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 ARHGEF19Q8IW93 802 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 THEM5Q8N1Q8 247 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 MRPL43Q8N983 215 aaKnown RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 TATDN2Q93075 761 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PPP1R9BQ96SB3 815 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 HERC2P3Q9BVR0 1158 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 OXCT2Q9BYC2 517 aaPredicted RBP10.13□□□□□ -0.79
ACTN4-207ENST00000495553 GPR62Q9BZJ7 368 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 ZBP1Q9H171 429 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 DEF6Q9H4E7 631 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 IGFLR1Q9H665 355 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 SIX2Q9NPC8 291 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 CISHQ9NSE2 258 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 ABHD10Q9NUJ1 306 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 PCDHGC5Q9Y5F6 944 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 XIRP2A4UGR9 3374 aa10.13□□□□□ -0.79
ACTN4-207ENST00000495553 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 HIDE1A8MVS5 230 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 PER2O15055 1255 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 MED7O43513 233 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 LRRN2O75325 713 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 TACC1O75410 805 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 NOL4O94818 638 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 SLC34A2O95436 690 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 SERPING1P05155 500 aa10.12□□□□□ -0.79
ACTN4-207ENST00000495553 CD58P19256 250 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms