RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 FTLP02792 175 aaPredicted RBP17.36■□□□□ 0.37
CBX4-204ENST00000495122 CYP1A2P05177 515 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 CLCN3P51790 818 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 NCOA4Q13772 614 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 PPP2R5EQ16537 467 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 SGSM1Q2NKQ1 1148 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 ZNF568Q3ZCX4 644 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 DAAM2Q86T65 1068 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 NT5DC3Q86UY8 548 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 COG1Q8WTW3 980 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 DDX1Q92499 740 aaKnown RBP17.36■□□□□ 0.37
CBX4-204ENST00000495122 KAT5Q92993 513 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 TATDN2Q93075 761 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 NLRP4Q96MN2 994 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 NAP1L3Q99457 506 aaPredicted RBP17.36■□□□□ 0.37
CBX4-204ENST00000495122 AVENQ9NQS1 362 aaPredicted RBP17.36■□□□□ 0.37
CBX4-204ENST00000495122 FAM53CQ9NYF3 392 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 PDE2AO00408 941 aaPredicted RBP17.35■□□□□ 0.37
CBX4-204ENST00000495122 ZNF185O15231 689 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 LPXNO60711 386 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 AMHP03971 560 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 KRT5P13647 590 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 TNFRSF8P28908 595 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 TNNC1P63316 161 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 NOP14P78316 857 aaKnown RBP17.35■□□□□ 0.37
CBX4-204ENST00000495122 GRIK4Q16099 956 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 TMEM132AQ24JP5 1023 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 CLEC16AQ2KHT3 1053 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 ACAD10Q6JQN1 1059 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 RUFY4Q6ZNE9 571 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 CD302Q8IX05 232 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 RASGEF1CQ8N431 466 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 SEPT8Q92599 483 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 VCPIP1Q96JH7 1222 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 ASB7Q9H672 318 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 IFT122Q9HBG6 1241 aa17.35■□□□□ 0.37
CBX4-204ENST00000495122 BDP1A6H8Y1 2624 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 MBLAC1A4D2B0 266 aaPredicted RBP17.34■□□□□ 0.37
CBX4-204ENST00000495122 LINC01553A4QN01 128 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 CCDC188H7C350 402 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 NCK2O43639 380 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 CLSTN1O94985 981 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 TMEM191BP0C7N4 346 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 ACO1P21399 889 aaKnown RBP17.34■□□□□ 0.37
CBX4-204ENST00000495122 ERVK-21P61565 698 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 HTRA4P83105 476 aaPredicted RBP17.34■□□□□ 0.37
CBX4-204ENST00000495122 MGAT3Q09327 533 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 PTPRJQ12913 1337 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 FAM117BQ6P1L5 589 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 UBR7Q8N806 425 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 GDPD5Q8WTR4 605 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 TRAPPC12Q8WVT3 735 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 NIF3L1Q9GZT8 377 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 THAP2Q9H0W7 228 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 CDT1Q9H211 546 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 CARD9Q9H257 536 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 RPF1Q9H9Y2 349 aaKnown RBP17.34■□□□□ 0.37
CBX4-204ENST00000495122 CTTNBP2NLQ9P2B4 639 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 AKT3Q9Y243 479 aa17.34■□□□□ 0.37
CBX4-204ENST00000495122 SMIM35A0A1B0GVV1 85 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 PGRMC1O00264 195 aaKnown RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 BUB1BO60566 1050 aaPredicted RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 CHRNA1P02708 482 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 RHOXF2BP0C7M4 288 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 ABCB4P21439 1286 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 MRPS5P82675 430 aaKnown RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 TRPC3Q13507 836 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 AMHR2Q16671 573 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 DCAF4L1Q3SXM0 396 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 ZBTB41Q5SVQ8 909 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 MARCH8Q5T0T0 291 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 TAF2Q6P1X5 1199 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 ZBTB33Q86T24 672 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 TTC39CQ8N584 583 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 UBL4BQ8N7F7 174 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 EIF1ADQ8N9N8 165 aaKnown RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.33■□□□□ 0.36
CBX4-204ENST00000495122 APBB2Q92870 758 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 TGS1Q96RS0 853 aaKnown RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 PNKPQ96T60 521 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 PCDHB18PQ96TA0 734 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 RHOXF2Q9BQY4 288 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
CBX4-204ENST00000495122 ZNF446Q9NWS9 450 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 TMEM59LQ9UK28 342 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 INSL6Q9Y581 213 aa17.33■□□□□ 0.36
CBX4-204ENST00000495122 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.32■□□□□ 0.36
CBX4-204ENST00000495122 TULP1O00294 542 aaPredicted RBP17.32■□□□□ 0.36
CBX4-204ENST00000495122 KCNK3O14649 394 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 LSM8O95777 96 aaKnown RBP17.32■□□□□ 0.36
CBX4-204ENST00000495122 CYP1A1P04798 512 aaPredicted RBP17.32■□□□□ 0.36
CBX4-204ENST00000495122 MMEP08473 750 aa17.32■□□□□ 0.36
CBX4-204ENST00000495122 HARSP12081 509 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms