RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CPSF3Q9UKF6 684 aaKnown RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 NEU2Q9Y3R4 380 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
CHMP3-209ENST00000494623 B4GALT5O43286 388 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 DDNO94850 711 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-209ENST00000494623 KRT19P08727 400 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ZSCAN5DPP0CG00 497 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 OGDHQ02218 1023 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 CNGA2Q16280 664 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 P3H1Q32P28 736 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 Q3C1V9 767 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 PPP1R2P3Q6NXS1 205 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 TAX1BP1Q86VP1 789 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ERICH1Q86X53 443 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 LRRC34Q8IZ02 419 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 CEP120Q8N960 986 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 HAUS1Q96CS2 278 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 SPATA33Q96N06 139 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-209ENST00000494623 KCNK9Q9NPC2 374 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 TBK1Q9UHD2 729 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ZBTB42B2RXF5 422 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 SOCS7O14512 581 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ETS1P14921 441 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 CD19P15391 556 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 MCL1Q07820 350 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF252P-AS1Q0IIN9 211 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF699Q32M78 642 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 MFSD5Q6N075 450 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 ARMC9Q7Z3E5 817 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM130Q8N3G9 435 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 DYDC1Q8WWB3 177 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 SERPINB12Q96P63 405 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 JPH2Q9BR39 696 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-209ENST00000494623 OSBPL7Q9BZF2 842 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-209ENST00000494623 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
CHMP3-209ENST00000494623 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 GOLGA8SH3BPF8 625 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 TJP3O95049 919 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 FSBPO95073 299 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 RAP1GAPP47736 663 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 GRM1Q13255 1194 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 CELF3Q5SZQ8 465 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ATF7IP2Q5U623 682 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 CDCA2Q69YH5 1023 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 BBOF1Q8ND07 529 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 RBM41Q96IZ5 413 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ELAC2Q9BQ52 826 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ABLIM1O14639 778 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 LIASO43766 372 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 CSDE1O75534 798 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 CNMDO75829 334 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 TNNC2P02585 160 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 HOXC6P09630 235 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 KLRC2P26717 231 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ACTN3Q08043 901 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ORC1Q13415 861 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 SURF1Q15526 300 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 SPRED3Q2MJR0 410 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 HP1BP3Q5SSJ5 553 aaPredicted RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 DENND1BQ6P3S1 775 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 SULF1Q8IWU6 871 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM192Q8IY95 271 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 ANKRD42Q8N9B4 389 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
CHMP3-209ENST00000494623 C2orf40Q9H1Z8 148 aa11.85□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM120BA0PK00 339 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 LRRD1A4D1F6 860 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 LSM8O95777 96 aaKnown RBP11.84□□□□□ -0.51
CHMP3-209ENST00000494623 ASPAP45381 313 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 CLCN3P51790 818 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 CDH8P55286 799 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 IGBP1P78318 339 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 MPZL3Q6UWV2 235 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 CYP4X1Q8N118 509 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 CCDC197Q8NCU1 140 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 ANKRD36BP1Q96IX9 119 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
CHMP3-209ENST00000494623 MPHOSPH6Q99547 160 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms