RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 BTBD10Q9BSF8 475 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 THTPAQ9BU02 230 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 ANKRD2Q9GZV1 360 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 CSRNP2Q9H175 543 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
ATG3-207ENST00000494571 ZNF277Q9NRM2 450 aaPredicted RBP4.25□□□□□ -1.73
ATG3-207ENST00000494571 ABI2Q9NYB9 513 aaPredicted RBP4.25□□□□□ -1.73
ATG3-207ENST00000494571 ARMCX1Q9P291 453 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 ARHGAP20Q9P2F6 1191 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 POLHQ9Y253 713 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 NOC2LQ9Y3T9 749 aaKnown RBP4.25□□□□□ -1.73
ATG3-207ENST00000494571 NUMBLQ9Y6R0 609 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 MYH13Q9UKX3 1938 aa4.25□□□□□ -1.73
ATG3-207ENST00000494571 LRRIQ4A6NIV6 560 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 LGALS16A8MUM7 142 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 H3BRJ5 948 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PRPF3O43395 683 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 SIN3BO75182 1162 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 NDUFS2O75306 463 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 BMP10O95393 424 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CCDC159P0C7I6 412 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CCDC130P13994 396 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ZNF12P17014 697 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 JAK1P23458 1154 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 IL32P24001 234 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CRABP2P29373 138 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 APLP1P51693 650 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RAP1GDS1P52306 607 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 HK2P52789 917 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 NCKAP1LP55160 1127 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 GNA12Q03113 381 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 AUHQ13825 339 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 ANKRD20A4Q4UJ75 823 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 HP1BP3Q5SSJ5 553 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 CCDC62Q6P9F0 684 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 KIF6Q6ZMV9 814 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SH3RF1Q7Z6J0 888 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SNX29P2Q8IUI4 249 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ERI1Q8IV48 349 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 SRBD1Q8N5C6 995 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 RFWD2Q8NHY2 731 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PPP1R14CQ8TAE6 165 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 FBXO25Q8TCJ0 367 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ZNF507Q8TCN5 953 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ZC3H15Q8WU90 426 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 BORCS5Q969J3 196 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 C1orf74Q96LT6 269 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ZNF717Q9BY31 904 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 USP44Q9H0E7 712 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CCDC134Q9H6E4 229 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 VPS37BQ9H9H4 285 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 FBXO6Q9NRD1 293 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 FARSBQ9NSD9 589 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 NCKIPSDQ9NZQ3 722 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 NEU2Q9Y3R4 380 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PCDHB6Q9Y5E3 794 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SLC30A1Q9Y6M5 507 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ADGRB2O60241 1585 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 FLT1P17948 1338 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 MYH7P12883 1935 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RGPD1P0DJD0 1748 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 A0A088AWK7 358 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 C1orf232A0A0U1RR37 186 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ANKRD62A6NC57 917 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SMCO2A6NFE2 343 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 C2orf71A6NGG8 1288 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ATP6V1G2-DDX39BF2Z307 99 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PGRMC1O00264 195 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 ITM2AO43736 263 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RANBP6O60518 1105 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 SRGAP2CP0DJJ0 459 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SRGAP2BP0DMP2 458 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 GYS1P13807 737 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PRKCAP17252 672 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 TAC1P20366 129 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 GRK2P25098 689 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 KLRC1P26715 233 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ATP5DP30049 168 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 EPHB1P54762 984 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PEX3P56589 373 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 POU6F2P78424 691 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 LSM11P83369 360 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATG3-207ENST00000494571 OTUD4Q01804 1114 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 KDSRQ06136 332 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 AIMP1Q12904 312 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 MEA1Q16626 185 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 KIAA1755Q5JYT7 1200 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RABGAP1LQ5R372 815 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 LDLRAP1Q5SW96 308 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CYP4A22Q5TCH4 519 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 UGT2A3Q6UWM9 527 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 VSTM1Q6UX27 236 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 GPR141Q7Z602 305 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CLNKQ7Z7G1 428 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ANKLE2Q86XL3 938 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 COL23A1Q86Y22 540 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 PDSS2Q86YH6 399 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 TMPRSS6Q8IU80 811 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms