RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 UBE2ZQ9H832 354 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 TTC12Q9H892 705 aaPredicted RBP9.01□□□□□ -0.97
RIF1-211ENST00000494333 TMEM161AQ9NX61 479 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 PRUNE2Q8WUY3 3088 aa9.01□□□□□ -0.97
RIF1-211ENST00000494333 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
RIF1-211ENST00000494333 CHURC1-FNTBB4DL54 471 aa9□□□□□ -0.97
RIF1-211ENST00000494333 SLITRK3O94933 977 aa9□□□□□ -0.97
RIF1-211ENST00000494333 SLITRK5O94991 958 aa9□□□□□ -0.97
RIF1-211ENST00000494333 TGFB1P01137 390 aa9□□□□□ -0.97
RIF1-211ENST00000494333 ITGB1P05556 798 aa9□□□□□ -0.97
RIF1-211ENST00000494333 POLGP54098 1239 aaPredicted RBP9□□□□□ -0.97
RIF1-211ENST00000494333 SPIRE1Q08AE8 756 aa9□□□□□ -0.97
RIF1-211ENST00000494333 CAMK1Q14012 370 aa9□□□□□ -0.97
RIF1-211ENST00000494333 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
RIF1-211ENST00000494333 NAALADL2Q58DX5 795 aa9□□□□□ -0.97
RIF1-211ENST00000494333 XKR9Q5GH70 373 aa9□□□□□ -0.97
RIF1-211ENST00000494333 EXOC8Q8IYI6 725 aa9□□□□□ -0.97
RIF1-211ENST00000494333 FAM184AQ8NB25 1140 aa9□□□□□ -0.97
RIF1-211ENST00000494333 RNF169Q8NCN4 708 aa9□□□□□ -0.97
RIF1-211ENST00000494333 FAM13CQ8NE31 585 aa9□□□□□ -0.97
RIF1-211ENST00000494333 SPPL3Q8TCT6 385 aa9□□□□□ -0.97
RIF1-211ENST00000494333 C8orf76Q96K31 380 aa9□□□□□ -0.97
RIF1-211ENST00000494333 NLRP4Q96MN2 994 aa9□□□□□ -0.97
RIF1-211ENST00000494333 MIPEPQ99797 713 aa9□□□□□ -0.97
RIF1-211ENST00000494333 EIF2AK1Q9BQI3 630 aaKnown RBP9□□□□□ -0.97
RIF1-211ENST00000494333 LXNQ9BS40 222 aa9□□□□□ -0.97
RIF1-211ENST00000494333 ZSWIM4Q9H7M6 989 aa9□□□□□ -0.97
RIF1-211ENST00000494333 TYW1Q9NV66 732 aaKnown RBP9□□□□□ -0.97
RIF1-211ENST00000494333 KLHL3Q9UH77 587 aa9□□□□□ -0.97
RIF1-211ENST00000494333 PCDHB12Q9Y5F1 795 aa9□□□□□ -0.97
RIF1-211ENST00000494333 TTC3P53804 2025 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 A0A0U1RQF3 1178 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 H3BQ06 376 aaPredicted RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 NEMFO60524 1076 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 SRGAP2CP0DJJ0 459 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 DNAJB1P25685 340 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 MCM7P33993 719 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 HMGN5P82970 282 aaKnown RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 GNL2Q13823 731 aaKnown RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 LEXMQ3ZCV2 418 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 ZNF410Q86VK4 478 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 ECHDC2Q86YB7 292 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 ABI1Q8IZP0 508 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 FBXO18Q8NFZ0 1043 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 POF1BQ8WVV4 589 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 PRPF31Q8WWY3 499 aaKnown RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 TMEM143Q96AN5 459 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 PABPC5Q96DU9 382 aaKnown RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 SPATA32Q96LK8 384 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 CASD1Q96PB1 797 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 MTMR9Q96QG7 549 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 HSD17B14Q9BPX1 270 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 TMEM117Q9H0C3 514 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 DHX33Q9H6R0 707 aaKnown RBP8.99□□□□□ -0.97
RIF1-211ENST00000494333 CAPN10Q9HC96 672 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 CHST12Q9NRB3 414 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 CLDND1Q9NY35 253 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 DACT1Q9NYF0 836 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 RNF112Q9ULX5 631 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
RIF1-211ENST00000494333 SIP14410 1827 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 COL4A6Q14031 1691 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 A0A087WWV3 80 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 NCK2O43639 380 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 FGF18O76093 207 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 EOMESO95936 686 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.97
RIF1-211ENST00000494333 GTF2F1P35269 517 aaKnown RBP eCLIP8.98□□□□□ -0.97
RIF1-211ENST00000494333 YARSP54577 528 aaKnown RBP8.98□□□□□ -0.97
RIF1-211ENST00000494333 HYAL1Q12794 435 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 ZNF174Q15697 407 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
RIF1-211ENST00000494333 TWF2Q6IBS0 349 aaKnown RBP8.98□□□□□ -0.97
RIF1-211ENST00000494333 LETMD1Q6P1Q0 360 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 LRRC55Q6ZSA7 311 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 FAM214BQ7L5A3 538 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 CATSPER4Q7RTX7 472 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 RBM23Q86U06 439 aaKnown RBP8.98□□□□□ -0.97
RIF1-211ENST00000494333 THNSL1Q8IYQ7 743 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 NEK9Q8TD19 979 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 TCP11Q8WWU5 503 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 PSPC1Q8WXF1 523 aaKnown RBP8.98□□□□□ -0.97
RIF1-211ENST00000494333 TMEM60Q9H2L4 133 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 FOXP1Q9H334 677 aaPredicted RBP8.98□□□□□ -0.97
RIF1-211ENST00000494333 CWH43Q9H720 699 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 IFT122Q9HBG6 1241 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 COL4A3BPQ9Y5P4 624 aa8.98□□□□□ -0.97
RIF1-211ENST00000494333 VCANP13611 3396 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 ASAP2O43150 1006 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 LYPLA2O95372 231 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 IL9P15248 144 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 LAG3P18627 525 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 LTBRP36941 435 aa8.97□□□□□ -0.97
RIF1-211ENST00000494333 TECP42680 631 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms