RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KRT5P13647 590 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 CD58P19256 250 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 TKTP29401 623 aaKnown RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 GNL1P36915 607 aaPredicted RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 STAT1P42224 750 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 POLR2FP61218 127 aaKnown RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 DSG1Q02413 1049 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 INCA1Q0VD86 236 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 PSMD5Q16401 504 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 CTXN3Q4LDR2 81 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 VARS2Q5ST30 1063 aaKnown RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 CNGA4Q8IV77 575 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 RIN2Q8WYP3 895 aaPredicted RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 PIK3R5Q8WYR1 880 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 STK33Q9BYT3 514 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 GPR62Q9BZJ7 368 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 SMYD3Q9H7B4 428 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 APOBEC3GQ9HC16 384 aaKnown RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.93■□□□□ 0.142e-17■■■■■ 38.7
ACTB-213ENST00000493945 CISHQ9NSE2 258 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 DDX43Q9NXZ2 648 aaKnown RBP15.93■□□□□ 0.14
ACTB-213ENST00000493945 DPP7Q9UHL4 492 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 CDH9Q9ULB4 789 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 L1RE1Q9UN81 338 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 PCDHB4Q9Y5E5 795 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 PLXNA4Q9HCM2 1894 aa15.93■□□□□ 0.14
ACTB-213ENST00000493945 NRDCO43847 1150 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 OAZ2O95190 189 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ADCY5O95622 1261 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ADH1AP07327 375 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 LINC00271P0C7V0 271 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 USP8P40818 1118 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 STILQ15468 1287 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 NFE2Q16621 373 aaPredicted RBP15.92■□□□□ 0.14
ACTB-213ENST00000493945 ARHGAP44Q17R89 818 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 SOWAHAQ2M3V2 549 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 WSCD1Q658N2 575 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 PHLDB3Q6NSJ2 640 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 RRAGAQ7L523 313 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 TMC6Q7Z403 805 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 TMEM173Q86WV6 379 aaPredicted RBP15.92■□□□□ 0.14
ACTB-213ENST00000493945 RNF168Q8IYW5 571 aaPredicted RBP15.92■□□□□ 0.14
ACTB-213ENST00000493945 POF1BQ8WVV4 589 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ACBD6Q9BR61 282 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ZBP1Q9H171 429 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ZNF576Q9H609 170 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 ZNHIT6Q9NWK9 470 aaKnown RBP15.92■□□□□ 0.14
ACTB-213ENST00000493945 KIAA1257Q9ULG3 409 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 LUC7L2Q9Y383 392 aaKnown RBP15.92■□□□□ 0.14
ACTB-213ENST00000493945 BACE2Q9Y5Z0 518 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 VWA8A3KMH1 1905 aa15.92■□□□□ 0.14
ACTB-213ENST00000493945 TRIOBPQ9H2D6 2365 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.91■□□□□ 0.14
ACTB-213ENST00000493945 I3L4J1 428 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 MED7O43513 233 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 PAEPP09466 180 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 WEE2P0C1S8 567 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 CPB1P15086 417 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 PBX1P40424 430 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 NDUFV1P49821 464 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 SLC8A3P57103 927 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 PTK2Q05397 1052 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 GPR153Q6NV75 609 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 TMEM270Q6UE05 265 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 C4orf50Q6ZRC1 276 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 ARHGEF19Q8IW93 802 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 C2orf15Q8WU43 125 aaKnown RBP15.91■□□□□ 0.14
ACTB-213ENST00000493945 TATDN2Q93075 761 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 SYT15Q9BQS2 421 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 GANQ9H2C0 597 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 NLRC4Q9NPP4 1024 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 FNIP2Q9P278 1114 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 MTRRQ9UBK8 725 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 STXBP5LQ9Y2K9 1186 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 FHOD1Q9Y613 1164 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 IRAK3Q9Y616 596 aa15.91■□□□□ 0.14
ACTB-213ENST00000493945 COL4A4P53420 1690 aaPredicted RBP15.9■□□□□ 0.14
ACTB-213ENST00000493945 F8VZ95 297 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 F8W810 466 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 RBAK-RBAKDNI3L0D1 243 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 GABRDO14764 452 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 LRRN2O75325 713 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 CILPO75339 1184 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 SRGAP2BP0DMP2 458 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 FERP16591 822 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 PDE6CP51160 858 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 NDST1P52848 882 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 ZBED6P86452 979 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 DRAP1Q14919 205 aaPredicted RBP15.9■□□□□ 0.14
ACTB-213ENST00000493945 CD300LGQ6UXG3 332 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 LIMS2Q7Z4I7 341 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 VPS36Q86VN1 386 aa15.9■□□□□ 0.14
ACTB-213ENST00000493945 SPPL3Q8TCT6 385 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms