RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 GPD1LQ8N335 351 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 FLCNQ8NFG4 579 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 ZCWPW1Q9H0M4 648 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 ZNF334Q9HCZ1 680 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-212ENST00000493940 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
HSPG2-212ENST00000493940 HSPBP1Q9NZL4 362 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 MRPS23Q9Y3D9 190 aaKnown RBP13.62□□□□□ -0.23
HSPG2-212ENST00000493940 YIPF1Q9Y548 306 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 CFAP54Q96N23 3096 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
HSPG2-212ENST00000493940 OR6C75A6NL08 312 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 KPNA7A9QM74 516 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 GFRA3O60609 400 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 LDHAP00338 332 aaKnown RBP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 CST3P01034 146 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 SRFP11831 508 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 ODC1P11926 461 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 CMA1P23946 247 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 NDUFA8P51970 172 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 STK4Q13043 487 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 SLC39A12Q504Y0 691 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 USP37Q86T82 979 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 KIAA0895Q8NCT3 520 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 STKLD1Q8NE28 680 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 ATOH1Q92858 354 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-212ENST00000493940 MTMR12Q9C0I1 747 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 AGPAT3Q9NRZ7 376 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 FAM86C1Q9NVL1 165 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 INTS13Q9NVM9 706 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 FAM13BQ9NYF5 915 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 L1RE1Q9UN81 338 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 NME7Q9Y5B8 376 aa13.61□□□□□ -0.23
HSPG2-212ENST00000493940 PROB1E7EW31 1015 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 LRRN2O75325 713 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 ATF6P18850 670 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 EPHA5P54756 1037 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 AMPD3Q01432 767 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 MYBPC2Q14324 1141 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 KMT5BQ4FZB7 885 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 FAM78AQ5JUQ0 283 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 NXPE3Q969Y0 559 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 ELMO3Q96BJ8 720 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 RSPRY1Q96DX4 576 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 SPATA32Q96LK8 384 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 LPIN3Q9BQK8 851 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 LRRC27Q9C0I9 530 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 SLC2A4RGQ9NR83 387 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 WNT16Q9UBV4 365 aa13.6□□□□□ -0.23
HSPG2-212ENST00000493940 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-212ENST00000493940 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 FAM237AA0A1B0GTK4 181 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 H0Y858 1186 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 MYL4P12829 197 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 GLULP15104 373 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 ACAT1P24752 427 aaKnown RBP13.59□□□□□ -0.23
HSPG2-212ENST00000493940 GPR15P49685 360 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 CYP2J2P51589 502 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 CLCN5P51795 746 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 TEAD2Q15562 447 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 GAREM2Q75VX8 874 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 LIMS2Q7Z4I7 341 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-212ENST00000493940 LRRC3BQ96PB8 259 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 FBXL21Q9UKT6 434 aa13.59□□□□□ -0.23
HSPG2-212ENST00000493940 MTF2Q9Y483 593 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-212ENST00000493940 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-212ENST00000493940 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-212ENST00000493940 ATP2C2O75185 946 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 KRT19P08727 400 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 AOC1P19801 751 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 CD72P21854 359 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 LMO2P25791 158 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 VIPR2P41587 438 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 CASP4P49662 377 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 BFSP1Q12934 665 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
HSPG2-212ENST00000493940 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 SV2CQ496J9 727 aa13.58□□□□□ -0.24
HSPG2-212ENST00000493940 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms