RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 DSEQ9UL01 958 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 SCN5AQ14524 2016 aa12.29□□□□□ -0.44
BRCA1-222ENST00000493919 RASA4BC9J798 803 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 SUPT3HO75486 399 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 STBD1O95210 358 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 POLGP54098 1239 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-222ENST00000493919 BPIFB3P59826 476 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
BRCA1-222ENST00000493919 HSPA14Q0VDF9 509 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 KIF5AQ12840 1032 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 GRAMD4Q6IC98 578 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 DSTYKQ6XUX3 929 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 ZNF365Q70YC5 407 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 DEFB128Q7Z7B8 93 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 IRGQQ8WZA9 623 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 PRPF18Q99633 342 aaKnown RBP12.28□□□□□ -0.44
BRCA1-222ENST00000493919 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 PCDHA2Q9Y5H9 948 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 EVPLQ92817 2033 aa12.28□□□□□ -0.44
BRCA1-222ENST00000493919 SMIM35A0A1B0GVV1 85 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 M0QZ92 97 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 RSPH10BP0C881 870 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 FUT4P22083 530 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 KRT9P35527 623 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 BLVRAP53004 296 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 DSTNP60981 165 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 MXRA7P84157 204 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 SPIDRQ14159 915 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 SLC39A14Q15043 492 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 TOMM20Q15388 145 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 ECM1Q16610 540 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 CYB5D1Q6P9G0 228 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 TAOK1Q7L7X3 1001 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 ARHGAP18Q8N392 663 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.44
BRCA1-222ENST00000493919 SLC7A3Q8WY07 619 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 SH3KBP1Q96B97 665 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 CLIC6Q96NY7 704 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 PLIN2Q99541 437 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.44
BRCA1-222ENST00000493919 DDX19AQ9NUU7 478 aaKnown RBP12.27□□□□□ -0.44
BRCA1-222ENST00000493919 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.44
BRCA1-222ENST00000493919 KIAA1024Q9UPX6 916 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 FADS3Q9Y5Q0 445 aa12.27□□□□□ -0.44
BRCA1-222ENST00000493919 KDM3AQ9Y4C1 1321 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 SIP14410 1827 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 E9PMD0 336 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 MAGEB2O15479 319 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 USO1O60763 962 aaKnown RBP12.27□□□□□ -0.45
BRCA1-222ENST00000493919 RNF40O75150 1001 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 BAIAP3O94812 1187 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 VTNP04004 478 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 IQCF3P0C7M6 154 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 ACRP10323 421 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 GZMAP12544 262 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
BRCA1-222ENST00000493919 TMOD1P28289 359 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.45
BRCA1-222ENST00000493919 CETN2P41208 172 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 UBA7P41226 1012 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 GPC3P51654 580 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 RBL2Q08999 1139 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■■■□ 20.9
BRCA1-222ENST00000493919 TARBP2Q15633 366 aaKnown RBP12.27□□□□□ -0.45
BRCA1-222ENST00000493919 LONRF2Q1L5Z9 754 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
BRCA1-222ENST00000493919 LINC00301Q8NCQ3 95 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 WDR60Q8WVS4 1066 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 GLMNQ92990 594 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 AK8Q96MA6 479 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 NACC1Q96RE7 527 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
BRCA1-222ENST00000493919 ARHGEF35A5YM69 484 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 IFRD1O00458 451 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 IDH3BO43837 385 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 BUB1BO60566 1050 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 LYPLA2O95372 231 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 YEATS4O95619 227 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 TUBBP07437 444 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 ACADVLP49748 655 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 RARRES1P49788 294 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 KRT85P78386 507 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 MRPS6P82932 125 aaKnown RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 EMC2Q15006 297 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 NDUFAF5Q5TEU4 345 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 CYP26C1Q6V0L0 522 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 FAM228AQ86W67 206 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 TOR1AIP2Q8NFQ8 470 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 RSAD2Q8WXG1 361 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 CASP10Q92851 521 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms