RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NR3C1P04150 777 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 PTPN2P17706 415 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 TNNI1P19237 187 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 PLD1Q13393 1074 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 TDGQ13569 410 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 CENPPQ6IPU0 288 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 TRAPPC11Q7Z392 1133 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 BMP8AQ7Z5Y6 402 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 ELMOD1Q8N336 334 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 GUF1Q8N442 669 aaKnown RBP24.34■■□□□ 1.49
SNIP1-203ENST00000493916 TOP6BLQ8N6T0 577 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 ITFG1Q8TB96 612 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 ASIC4Q96FT7 647 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 TIGD1Q96MW7 591 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 CRISPLD1Q9H336 500 aa24.34■■□□□ 1.49
SNIP1-203ENST00000493916 DOCK8Q8NF50 2099 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 ANHXE9PGG2 379 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 CALUO43852 315 aaPredicted RBP24.33■■□□□ 1.49
SNIP1-203ENST00000493916 SMARCB1Q12824 385 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 DUSP4Q13115 394 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 PNOCQ13519 176 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 NFIL3Q16649 462 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 SLC39A12Q504Y0 691 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 HFE2Q6ZVN8 426 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 C2orf15Q8WU43 125 aaKnown RBP24.33■■□□□ 1.49
SNIP1-203ENST00000493916 FGF13Q92913 245 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 HPDLQ96IR7 371 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 RMND1Q9NWS8 449 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 SNX9Q9Y5X1 595 aa24.33■■□□□ 1.49
SNIP1-203ENST00000493916 TECTAO75443 2155 aa24.33■■□□□ 1.48
SNIP1-203ENST00000493916 NOTCH4Q99466 2003 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 CLDN10P78369 228 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 HTR4Q13639 388 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 SLC5A9Q2M3M2 681 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 LIMS2Q7Z4I7 341 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 ATAD1Q8NBU5 361 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 CORO1BQ9BR76 489 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 SMOC2Q9H3U7 446 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 CEP72Q9P209 647 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 DUSP12Q9UNI6 340 aa24.32■■□□□ 1.48
SNIP1-203ENST00000493916 MRPS23Q9Y3D9 190 aaKnown RBP24.32■■□□□ 1.48
SNIP1-203ENST00000493916 MICAL2O94851 1124 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 COL9A1P20849 921 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 EPHA5P54756 1037 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 PRSS36Q5K4E3 855 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 IQCEQ6IPM2 695 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 DPH6Q7L8W6 267 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 NPAS3Q8IXF0 933 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 DCP1BQ8IZD4 617 aaKnown RBP24.31■■□□□ 1.48
SNIP1-203ENST00000493916 ADGRF2Q8IZF7 708 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 LEMD2Q8NC56 503 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 PLEKHO2Q8TD55 490 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 PARD3BQ8TEW8 1205 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 ZNF516Q92618 1163 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 ZNF512Q96ME7 567 aaPredicted RBP24.31■■□□□ 1.48
SNIP1-203ENST00000493916 GSDMAQ96QA5 445 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 ACBD6Q9BR61 282 aa24.31■■□□□ 1.48
SNIP1-203ENST00000493916 ZNF197O14709 1029 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 ALDH1A3P47895 512 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 AP3M2P53677 418 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 EPHB3P54753 998 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 TSPY1Q01534 308 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 SOWAHAQ2M3V2 549 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 LRRTM3Q86VH5 581 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 ELOA2Q8IYF1 753 aaPredicted RBP24.3■■□□□ 1.48
SNIP1-203ENST00000493916 SPATA20Q8TB22 786 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 SPPL2BQ8TCT7 592 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 DNAJC25Q9H1X3 360 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 DDX43Q9NXZ2 648 aaKnown RBP24.3■■□□□ 1.48
SNIP1-203ENST00000493916 GDE1Q9NZC3 331 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 HOOK1Q9UJC3 728 aaKnown RBP24.3■■□□□ 1.48
SNIP1-203ENST00000493916 MAPK8IP1Q9UQF2 711 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 SLC27A5Q9Y2P5 690 aa24.3■■□□□ 1.48
SNIP1-203ENST00000493916 DOCK6Q96HP0 2047 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 LRRIQ3A6PVS8 624 aaPredicted RBP24.29■■□□□ 1.48
SNIP1-203ENST00000493916 GABRDO14764 452 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 MAPK13O15264 365 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 SMC2O95347 1197 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 STAU1O95793 577 aaKnown RBP24.29■■□□□ 1.48
SNIP1-203ENST00000493916 ANP32AP39687 249 aaKnown RBP24.29■■□□□ 1.48
SNIP1-203ENST00000493916 LHX1P48742 406 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 TUFMP49411 452 aaKnown RBP24.29■■□□□ 1.48
SNIP1-203ENST00000493916 CASP4P49662 377 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 MYL7Q01449 175 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 ZCWPW2Q504Y3 356 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 MTSS1LQ765P7 747 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 PDZD4Q76G19 769 aaPredicted RBP24.29■■□□□ 1.48
SNIP1-203ENST00000493916 TTC9BQ8N6N2 239 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 RSAD2Q8WXG1 361 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 ASAH2Q9NR71 780 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 CHMP5Q9NZZ3 219 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 FRMD4BQ9Y2L6 1034 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 ASB3Q9Y575 518 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 NUMBLQ9Y6R0 609 aa24.29■■□□□ 1.48
SNIP1-203ENST00000493916 CST3P01034 146 aaPredicted RBP24.28■■□□□ 1.48
SNIP1-203ENST00000493916 CEBPBP17676 345 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 NR2F2P24468 414 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 COBLL1Q53SF7 1204 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 CYP4A22Q5TCH4 519 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 OSTM1Q86WC4 334 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms