RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 ILDR2Q71H61 639 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 ERICH1Q86X53 443 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 CCDC105Q8IYK2 499 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 TFAP2BQ92481 460 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 ADAMTS10Q9H324 1103 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 NXF1Q9UBU9 619 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 Q9Y3F1 56 aa11.45□□□□□ -0.58
PHACTR4-204ENST00000493669 MGAMO43451 1857 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 CILPO75339 1184 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 SGO2Q562F6 1265 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RBM41Q96IZ5 413 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 TXLNGYQ9BZA5 131 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 MTRF1LQ9UGC7 380 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 PLAAQ9Y263 795 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 KAT6AQ92794 2004 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 GOLGA6L10A6NI86 522 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RAD23BP54727 409 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 INCA1Q0VD86 236 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 KIAA1257Q9ULG3 409 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 HMGB1P1B2RPK0 211 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 AXLP30530 894 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 EIF3BP55884 814 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 HUNKP57058 714 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 COPS2P61201 443 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 C2CD6Q53TS8 623 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RUFY4Q6ZNE9 571 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 RCOR2Q8IZ40 523 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 FNIP1Q8TF40 1166 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 GRHL1Q9NZI5 618 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 CPA4Q9UI42 421 aa11.44□□□□□ -0.58
PHACTR4-204ENST00000493669 DYNC1LI2O43237 492 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 ADCY6O43306 1168 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 HMGCRP04035 888 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF865P0CJ78 1059 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 VDRP11473 427 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 CD19P15391 556 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 PTPN7P35236 360 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 CPT1AP50416 773 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 PTPN11Q06124 597 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 KLF1Q13351 362 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TTMPQ5BVD1 217 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 CST9Q5W186 159 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SLC27A1Q6PCB7 646 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 DCUN1D2Q6PH85 259 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 ZDHHC24Q6UX98 284 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 PHLDB2Q86SQ0 1253 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 RASAL3Q86YV0 1011 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 USP6NLQ92738 828 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TMEM176AQ96HP8 235 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 PPP1R16BQ96T49 567 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SETD4Q9NVD3 440 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 DPP3Q9NY33 737 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 H0YGN5 161 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SHOX2O60902 331 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 GPR32O75388 356 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 CSDE1O75534 798 aaKnown RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 GAS8O95995 478 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TAS2R40P59535 323 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 DHX9Q08211 1270 aaKnown RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 STILQ15468 1287 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TLK2Q86UE8 772 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SLC4A11Q8NBS3 891 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 DCLK3Q9C098 648 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 MIS12Q9H081 205 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 DDX56Q9NY93 547 aaKnown RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 WHRNQ9P202 907 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 SNX24Q9Y343 169 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 NFS1Q9Y697 457 aa11.43□□□□□ -0.58
PHACTR4-204ENST00000493669 HAS3O00219 553 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 CAPN2P17655 700 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 SKOR1P84550 965 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 ZNF268Q14587 947 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 MFSD10Q14728 455 aa11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 TAF1CQ15572 869 aaPredicted RBP11.42□□□□□ -0.58
PHACTR4-204ENST00000493669 CNGA2Q16280 664 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms