RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 LAMP2P13473 410 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 KRT13P13646 458 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 NR2F2P24468 414 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 PSMC2P35998 433 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ALDH1A3P47895 512 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 LHX1P48742 406 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 TUFMP49411 452 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 EPHB3P54753 998 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ZXDAP98168 799 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 MYL7Q01449 175 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 TSPY1Q01534 308 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 TWF1Q12792 350 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 DUSP4Q13115 394 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ADAM9Q13443 819 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 MTMR3Q13615 1198 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 NFIL3Q16649 462 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 PABPC1LQ4VXU2 614 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 SLC39A12Q504Y0 691 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CYP4A22Q5TCH4 519 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CEP135Q66GS9 1140 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CENPPQ6IPU0 288 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 GET4Q7L5D6 327 aaPredicted RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 UBALD2Q8IYN6 164 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 TOP6BLQ8N6T0 577 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CXorf38Q8TB03 319 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 SPATA18Q8TC71 538 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 PARD3BQ8TEW8 1205 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 C2orf15Q8WU43 125 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF516Q92618 1163 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 PGLYRP2Q96PD5 576 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 MMS19Q96T76 1030 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ACBD6Q9BR61 282 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CORO1BQ9BR76 489 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 ZCWPW1Q9H0M4 648 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 IGSF9Q9P2J2 1179 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 EPS15L1Q9UBC2 864 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 DNMT3BQ9UBC3 853 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 HSFX1Q9UBD0 423 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 SIX4Q9UIU6 781 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 SORCS3Q9UPU3 1222 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 MRPS23Q9Y3D9 190 aaKnown RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 PCDHA5Q9Y5H7 936 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 XIRP2A4UGR9 3374 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 TTC28Q96AY4 2481 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 MTMR11A4FU01 709 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PRR33A8MZF0 331 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 IKBKBO14920 756 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 CETN3O15182 167 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 MAPK13O15264 365 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 GADD45BO75293 160 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 RHOP08100 348 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PCSK1P29120 753 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 ATICP31939 592 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PPP1R2P41236 205 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PRCPP42785 496 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 CASP4P49662 377 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 VAMP7P51809 220 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 UBE2HP62256 183 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TNNC1P63316 161 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 CLDN10P78369 228 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 NTHL1P78549 312 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 BIRC3Q13489 604 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TDGQ13569 410 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 STIM1Q13586 685 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 NFE2Q16621 373 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SOWAHAQ2M3V2 549 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 EDRF1Q3B7T1 1238 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 COBLL1Q53SF7 1204 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SCARA3Q6AZY7 606 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TRIM67Q6ZTA4 783 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 INTS8Q75QN2 995 aaKnown RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 ITIH5Q86UX2 942 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SMYD4Q8IYR2 804 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 ADGRF2Q8IZF7 708 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PDCL2Q8N4E4 241 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 ATAD1Q8NBU5 361 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 LEMD2Q8NC56 503 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 OR10T2Q8NGX3 314 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SPATA20Q8TB22 786 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SPPL2BQ8TCT7 592 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TMC2Q8TDI7 906 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SYAP1Q96A49 352 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 MYADMQ96S97 322 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 TSG101Q99816 390 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 RTP3Q9BQQ7 232 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 LRFN3Q9BTN0 628 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SNX25Q9H3E2 840 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 KCNK12Q9HB15 430 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 HCFC1R1Q9NWW0 138 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 DDX43Q9NXZ2 648 aaKnown RBP7.49□□□□□ -1.21
TOP3A-207ENST00000493648 CDH7Q9ULB5 785 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 SLC27A5Q9Y2P5 690 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 ASB3Q9Y575 518 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 DENND4AQ7Z401 1863 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 PTPRJQ12913 1337 aa7.49□□□□□ -1.21
TOP3A-207ENST00000493648 DOCK6Q96HP0 2047 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms