RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 POLR2FP61218 127 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 HABP4Q5JVS0 413 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 KLHDC7AQ5VTJ3 777 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 IQCEQ6IPM2 695 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 THEM5Q8N1Q8 247 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 MRPL17Q9NRX2 175 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 DDX43Q9NXZ2 648 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 PCDHB4Q9Y5E5 795 aa16.85■□□□□ 0.29
HPS4-216ENST00000493455 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
HPS4-216ENST00000493455 A8MXQ7 604 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 EPHB6O15197 1021 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 OR4Q2P0C623 313 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 KRT5P13647 590 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 TRIM21P19474 475 aaKnown RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 TYMPP19971 482 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 GNL1P36915 607 aaPredicted RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 ZNF75DP51815 510 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 UBE3AQ05086 875 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 SARM1Q6SZW1 724 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 RNF168Q8IYW5 571 aaPredicted RBP16.84■□□□□ 0.29
HPS4-216ENST00000493455 TMEM86AQ8N2M4 240 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 CPLX3Q8WVH0 158 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 BCO2Q9BYV7 579 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 HMGXB4Q9UGU5 601 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 LZTS1Q9Y250 596 aa16.84■□□□□ 0.29
HPS4-216ENST00000493455 H7C4K7 107 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 EFEMP2O95967 443 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 CYP11A1P05108 521 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.28
HPS4-216ENST00000493455 CTSAP10619 480 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 CPB1P15086 417 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 UCHL3P15374 230 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 WARSP23381 471 aaKnown RBP16.83■□□□□ 0.28
HPS4-216ENST00000493455 LMO2P25791 158 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 NDST1P52848 882 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 YWHAEP62258 255 aaKnown RBP16.83■□□□□ 0.28
HPS4-216ENST00000493455 DSG1Q02413 1049 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 GRIN2CQ14957 1233 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 PTPN14Q15678 1187 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 ANKS3Q6ZW76 656 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 Q7L0L9 218 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 DPH6Q7L8W6 267 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 TMC6Q7Z403 805 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 KREMEN1Q96MU8 473 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 TMEM209Q96SK2 561 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 GANQ9H2C0 597 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 DPEP3Q9H4B8 488 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 CISHQ9NSE2 258 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 CDY1Q9Y6F8 540 aa16.83■□□□□ 0.28
HPS4-216ENST00000493455 MYH10P35580 1976 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 A0A1W2PQC6 194 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 HIDE1A8MVS5 230 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 TACC1O75410 805 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 NOL4O94818 638 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 IGFBP4P22692 258 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 LHX1P48742 406 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 GCNT1Q02742 428 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 CAMK1Q14012 370 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 GSE1Q14687 1217 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 PTPROQ16827 1216 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 KIAA0319Q5VV43 1072 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 RBM23Q86U06 439 aaKnown RBP16.82■□□□□ 0.28
HPS4-216ENST00000493455 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 MICALL1Q8N3F8 863 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 LNX1Q8TBB1 728 aaPredicted RBP16.82■□□□□ 0.28
HPS4-216ENST00000493455 PIK3R5Q8WYR1 880 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 SPAG5Q96R06 1193 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 LPIN3Q9BQK8 851 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 SYT15Q9BQS2 421 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 PLCB1Q9NQ66 1216 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 CHST7Q9NS84 486 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 STK39Q9UEW8 545 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
HPS4-216ENST00000493455 TMEM265A0A087WTH1 108 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 ATP2C2O75185 946 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 ADCY5O95622 1261 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 CALCAP01258 141 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 OR1D2P34982 312 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 TSPY1Q01534 308 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 DRAP1Q14919 205 aaPredicted RBP16.81■□□□□ 0.28
HPS4-216ENST00000493455 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 DPY19L2P1Q6NXN4 242 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 RBBP8NLQ8NC74 664 aaPredicted RBP16.81■□□□□ 0.28
HPS4-216ENST00000493455 OR10T2Q8NGX3 314 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 TWNKQ96RR1 684 aa16.81■□□□□ 0.28
HPS4-216ENST00000493455 RTP3Q9BQQ7 232 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms