RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CACNG4Q9UBN1 327 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 ITGA11Q9UKX5 1188 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 AGAP1Q9UPQ3 857 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 MTCL1Q9Y4B5 1905 aaKnown RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 GTPBP10A4D1E9 387 aaKnown RBP14.41□□□□□ -0.1
MSH6-208ENST00000493177 F8W810 466 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 CNPP09543 421 aaKnown RBP14.41□□□□□ -0.1
MSH6-208ENST00000493177 CREMQ03060 361 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 SOX4Q06945 474 aaPredicted RBP14.41□□□□□ -0.1
MSH6-208ENST00000493177 LRMPQ12912 555 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 KCNC3Q14003 757 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 WDR44Q5JSH3 913 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 SYCE2Q6PIF2 218 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 C15orf39Q6ZRI6 1047 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 TAS1R1Q7RTX1 841 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 DRC7Q8IY82 874 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 EHBP1Q8NDI1 1231 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 RIN2Q8WYP3 895 aaPredicted RBP14.41□□□□□ -0.1
MSH6-208ENST00000493177 IMPG2Q9BZV3 1241 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 INTS2Q9H0H0 1204 aaKnown RBP14.41□□□□□ -0.1
MSH6-208ENST00000493177 SFXN1Q9H9B4 322 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.41□□□□□ -0.1
MSH6-208ENST00000493177 DPP7Q9UHL4 492 aa14.41□□□□□ -0.1
MSH6-208ENST00000493177 PMM2O15305 246 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 DCXO43602 365 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 KIF4AO95239 1232 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 VNN1O95497 513 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 GLUD1P00367 558 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 CST3P01034 146 aaPredicted RBP14.4□□□□□ -0.1
MSH6-208ENST00000493177 SLC9A1P19634 815 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 MTHFRP42898 656 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 KLK7P49862 253 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 MYL6P60660 151 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 DSG1Q02413 1049 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 KCNMA1Q12791 1236 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 ELAVL2Q12926 359 aaKnown RBP14.4□□□□□ -0.1
MSH6-208ENST00000493177 TMEM31Q5JXX7 168 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 ATAT1Q5SQI0 421 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 FAM171A1Q5VUB5 890 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 C9orf57Q5W0N0 161 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 C12orf76Q8N812 135 aaPredicted RBP14.4□□□□□ -0.1
MSH6-208ENST00000493177 SEMA4DQ92854 862 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 B3GALT6Q96L58 329 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 ZNF560Q96MR9 790 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 UROC1Q96N76 676 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 NECTIN4Q96NY8 510 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 PAAF1Q9BRP4 392 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 PI4K2AQ9BTU6 479 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 GPR62Q9BZJ7 368 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 ADAM7Q9H2U9 754 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 NR2E1Q9Y466 385 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 C2orf16Q68DN1 1984 aa14.4□□□□□ -0.1
MSH6-208ENST00000493177 A0A1W2PQC6 194 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 PI4K2BG5E9Z4 385 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 PODXLO00592 558 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 PPEF2O14830 753 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 B3GAT3O94766 335 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 WEE2P0C1S8 567 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 PON1P27169 355 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 LRPAP1P30533 357 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 CLCN4P51793 760 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 CLCNKBP51801 687 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 MYO1EQ12965 1108 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 NAB2Q15742 525 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 SGSM1Q2NKQ1 1148 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 ZNF699Q32M78 642 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 TMC5Q6UXY8 1006 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 TMC6Q7Z403 805 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 PALB2Q86YC2 1186 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 NEK11Q8NG66 645 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 SLC22A17Q8WUG5 538 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.11
MSH6-208ENST00000493177 ELMO3Q96BJ8 720 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
MSH6-208ENST00000493177 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 HPDLQ96IR7 371 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 NT5C1BQ96P26 610 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 ERGIC2Q96RQ1 377 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 S1PR5Q9H228 398 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 FAM207AQ9NSI2 230 aaPredicted RBP14.39□□□□□ -0.11
MSH6-208ENST00000493177 COQ4Q9Y3A0 265 aa14.39□□□□□ -0.11
MSH6-208ENST00000493177 SPTBN5Q9NRC6 3674 aaKnown RBP14.38□□□□□ -0.11
MSH6-208ENST00000493177 FAM86C2PA6NEL3 165 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 TEX28O15482 410 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 TRAPPC3O43617 180 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 LRRN2O75325 713 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 ATICP31939 592 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 RPL9P32969 192 aaKnown RBP14.38□□□□□ -0.11
MSH6-208ENST00000493177 PNPLA4P41247 253 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 TAF6P49848 677 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 PSMD5Q16401 504 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 SPOPLQ6IQ16 392 aa14.38□□□□□ -0.11
MSH6-208ENST00000493177 PDXDC1Q6P996 788 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms