RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ZNF598Q86UK7 904 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 RTN4RL1Q86UN2 441 aaPredicted RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 METTL23Q86XA0 190 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 ZNF677Q86XU0 584 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 DDX27Q96GQ7 796 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 HEXIM2Q96MH2 286 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 MRPL45Q9BRJ2 306 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 HTATIP2Q9BUP3 242 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 MRPL9Q9BYD2 267 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 BCO2Q9BYV7 579 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 SDCBP2Q9H190 292 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 ELAC1Q9H777 363 aaKnown RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 ACP6Q9NPH0 428 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 KANSL3Q9P2N6 904 aa8.57□□□□□ -1.04
FDPS-218ENST00000492887 PRG3Q9Y2Y8 225 aaPredicted RBP8.57□□□□□ -1.04
FDPS-218ENST00000492887 ANO9A1A5B4 782 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 TRIM43BA6NCK2 446 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 M0QYV0 167 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 KIF2AO00139 706 aaPredicted RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 DDX3XO00571 662 aaKnown RBP eCLIP8.56□□□□□ -1.04
FDPS-218ENST00000492887 KIAA0355O15063 1070 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 ZNF500O60304 480 aaPredicted RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 CILPO75339 1184 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 PFKMP08237 780 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 PDGFRBP09619 1106 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 ODC1P11926 461 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 CSF2RAP15509 400 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 ACO1P21399 889 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 RPL9P32969 192 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 NSFP46459 744 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 BRCC3P46736 316 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 NDST1P52848 882 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 GNG11P61952 73 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 FMO1Q01740 532 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 TCTN1Q2MV58 587 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 SGO2Q562F6 1265 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 NAA35Q5VZE5 725 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 TRIM72Q6ZMU5 477 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.56□□□□□ -1.041e-11■■■■□ 22.1
FDPS-218ENST00000492887 DNAAF5Q86Y56 855 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 REXO1L1PQ8IX06 675 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 LRRC43Q8N309 656 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 TOP6BLQ8N6T0 577 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 MSANTD4Q8NCY6 345 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 SECISBP2LQ93073 1101 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 TRIM43Q96BQ3 446 aaPredicted RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 ZNF653Q96CK0 615 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 TMEM176AQ96HP8 235 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 FAXDC2Q96IV6 333 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 SENP8Q96LD8 212 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 MED10Q9BTT4 135 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 SYNCQ9H7C4 482 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 RRAGDQ9NQL2 400 aaPredicted RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 TBC1D13Q9NVG8 400 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 MYO1AQ9UBC5 1043 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 HMGXB4Q9UGU5 601 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 NAGPAQ9UK23 515 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 BARX2Q9UMQ3 279 aaPredicted RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 TFR2Q9UP52 801 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 DNAH12Q6ZR08 3092 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 GREB1Q4ZG55 1949 aa8.56□□□□□ -1.04
FDPS-218ENST00000492887 MTCL1Q9Y4B5 1905 aaKnown RBP8.56□□□□□ -1.04
FDPS-218ENST00000492887 A0A0U1RQJ8 604 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 ABHD14A-ACY1A0A1B0GW23 586 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
FDPS-218ENST00000492887 CCDC85CA6NKD9 419 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 I3L4J1 428 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 BUB1O43683 1085 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 EFCAB14O75071 495 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 RTN2O75298 545 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 TACC1O75410 805 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 TADA2AO75478 443 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 PAEPP09466 180 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 VDRP11473 427 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 SYN1P17600 705 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 ADORA2BP29275 332 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 CASQ1P31415 396 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 GNL1P36915 607 aaPredicted RBP8.55□□□□□ -1.04
FDPS-218ENST00000492887 BCAR1P56945 870 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 LILRA4P59901 499 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 FPGSQ05932 587 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 GPNMBQ14956 572 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 NAB2Q15742 525 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 IFI16Q16666 785 aaKnown RBP8.55□□□□□ -1.04
FDPS-218ENST00000492887 GOLGA7BQ2TAP0 167 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 LIN9Q5TKA1 542 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 PPP1R2P3Q6NXS1 205 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 SYT10Q6XYQ8 523 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 FAM43BQ6ZT52 329 aaPredicted RBP8.55□□□□□ -1.04
FDPS-218ENST00000492887 OTOP2Q7RTS6 562 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 ACOT1Q86TX2 421 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 UBR7Q8N806 425 aa8.55□□□□□ -1.04
FDPS-218ENST00000492887 C1orf131Q8NDD1 294 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms