RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 VSIG10LQ86VR7 867 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF280CQ8ND82 737 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ACTL9Q8TC94 416 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZNF317Q96PQ6 595 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NEBLO76041 1014 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CPP00450 1065 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GBP1P32455 592 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 STAT5BP51692 787 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ABRAQ8N0Z2 381 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TMEM35BQ8NCS4 154 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 DTX3LQ8TDB6 740 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CISHQ9NSE2 258 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ZBTB48P10074 688 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 KRT3P12035 628 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 GLRA2P23416 452 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ALDH3A1P30838 453 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 TMEM132BQ14DG7 1078 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NPNTQ6UXI9 565 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FITM2Q8N6M3 262 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 AGAP11Q8TF27 550 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MAML1Q92585 1016 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 LRRC37BQ96QE4 947 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NCAPGQ9BPX3 1015 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ARL2BPQ9Y2Y0 163 aa16.03■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FSCN2O14926 492 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CD48P09326 243 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MSH2P43246 934 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NCKAP1LP55160 1127 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 OTUD4Q01804 1114 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.02■□□□□ 0.162e-7■□□□□ 9
TNFRSF1B-203ENST00000492361 B4GALT5O43286 388 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 AVILO75366 819 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ANP32DO95626 131 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 RFC1P35251 1148 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 MMRN1Q13201 1228 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 VSTM1Q6UX27 236 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 CENPUQ71F23 418 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 PSPC1Q8WXF1 523 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 COPS5Q92905 334 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 ACAD9Q9H845 621 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 NENFQ9UMX5 172 aa16.02■□□□□ 0.16
TNFRSF1B-203ENST00000492361 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 RNF8O76064 485 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 FOXN2P32314 431 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 BACE1P56817 501 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 KRT81Q14533 505 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 HIF1AQ16665 826 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 CROCCP2Q86T23 111 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 LPAR1Q92633 364 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 DDX27Q96GQ7 796 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 FAM49BQ9NUQ9 324 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 PHTF1Q9UMS5 762 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 NR2E3Q9Y5X4 410 aa16.02■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SPARCL1Q14515 664 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 TEX13BQ9BXU2 312 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 LRRC19Q9H756 370 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 WHRNQ9P202 907 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 AKT3Q9Y243 479 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 M0QYV0 167 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 TNNC2P02585 160 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SUGP1Q8IWZ8 645 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 DDX1Q92499 740 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 OTUD5Q96G74 571 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 MRIQ9BWK5 157 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 NRBP2Q9NSY0 501 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SEPT10Q9P0V9 454 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 IP6K2Q9UHH9 426 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 CCDC78A2IDD5 438 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 NQO1P15559 274 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 ADRA1DP25100 572 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 RXRBP28702 533 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 TCF7P36402 384 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 CDH6P55285 790 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 COPS2P61201 443 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 NOMO3P69849 1222 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 MAPK6Q16659 721 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 MYPNQ86TC9 1320 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 VPS52Q8N1B4 723 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 JOSD2Q8TAC2 188 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
TNFRSF1B-203ENST00000492361 RASSF9O75901 435 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 VNN1O95497 513 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 MT-ND3P03897 115 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 FDX1P10109 184 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 CXCL8P10145 99 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 NUMBP49757 651 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 ZACNQ401N2 412 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 TAS1R3Q7RTX0 852 aa16■□□□□ 0.15
TNFRSF1B-203ENST00000492361 VTI1AQ96AJ9 217 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms