RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 LDHAP00338 332 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 VTNP04004 478 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 MMP8P22894 467 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 NFX1Q12986 1120 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 WDR72Q3MJ13 1102 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 PTPN20Q4JDL3 420 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RHBDF2Q6PJF5 856 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 EXOC3L1Q86VI1 746 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF677Q86XU0 584 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
HMGN1-220ENST00000492280 SEC16BQ96JE7 1060 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 NINJ2Q9NZG7 142 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 ANAPC5Q9UJX4 755 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
HMGN1-220ENST00000492280 A0A0G2JMZ2 1700 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 RFC5P40937 340 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ASPAP45381 313 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF132P52740 706 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 TAF5Q15542 800 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM121Q9BTD3 319 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 NIF3L1Q9GZT8 377 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 A0A087WUV0 522 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 OGTO15294 1046 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 GAS8O95995 478 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 CD48P09326 243 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 MYBL1P10243 752 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 TBXAS1P24557 533 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 MMP13P45452 471 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 PTK6Q13882 451 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ERMARDQ5T6L9 678 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 PHF13Q86YI8 300 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 FAM129AQ9BZQ8 928 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 INTS9Q9NV88 658 aaKnown RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 PCSK1NQ9UHG2 260 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 CPSF3Q9UKF6 684 aaKnown RBP13.18□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
HMGN1-220ENST00000492280 H0YHG0 523 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 GPR25O00155 361 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 VIMP08670 466 aaKnown RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 DRD4P21917 467 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 SLMAPQ14BN4 828 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 CLUL1Q15846 466 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 WDR49Q8IV35 697 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 UBR7Q8N806 425 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 ARHGEF2Q92974 986 aaKnown RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 PGM2Q96G03 612 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 CDT1Q9H211 546 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 GRAP2O75791 330 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 ITGB3P05106 788 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 IL1R2P27930 398 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 SLC1A1P43005 524 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 MPP2Q14168 576 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 PIWIL1Q96J94 861 aaKnown RBP13.17□□□□□ -0.3
HMGN1-220ENST00000492280 MMP19Q99542 508 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 KIF9Q9HAQ2 790 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 SIX4Q9UIU6 781 aa13.17□□□□□ -0.3
HMGN1-220ENST00000492280 A0A087WZ62 844 aa13.16□□□□□ -0.3
HMGN1-220ENST00000492280 A0A0G2JLL6 359 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-220ENST00000492280 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
HMGN1-220ENST00000492280 PSTPIP1O43586 416 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms