RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CEP72Q9P209 647 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 PCDHGA2Q9Y5H1 932 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 NCOR2Q9Y618 2525 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 EPG5Q9HCE0 2579 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 SCN1AP35498 2009 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 FRMD3A2A2Y4 597 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 MTMR11A4FU01 709 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 ANKRD63C9JTQ0 380 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 DPYSL4O14531 572 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 CYB561D2O14569 222 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 CHADO15335 359 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 STX6O43752 255 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 PPP6R2O75170 966 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 PPP1R37O75864 691 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 NFICP08651 508 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 SDHBP21912 280 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 FCARP24071 287 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 DDX6P26196 483 aaKnown RBP eCLIP9.45□□□□□ -0.9
NUP50-217ENST00000491860 ACOT2P49753 483 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 NRLP54845 237 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 TSPY1Q01534 308 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 DUSP4Q13115 394 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 NFE2Q16621 373 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 ZC2HC1CQ53FD0 456 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 SLC39A4Q6P5W5 647 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 LRRC52Q8N7C0 313 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 ZSCAN18Q8TBC5 510 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 TCEAL4Q96EI5 215 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 PGLYRP2Q96PD5 576 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 PYM1Q9BRP8 204 aaKnown RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 STRA6Q9BX79 667 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 KIAA1586Q9HCI6 787 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 ZNF334Q9HCZ1 680 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 ITGA11Q9UKX5 1188 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 TIMM13Q9Y5L4 95 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 R4GN57 208 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 CEP250Q9BV73 2442 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 PATJQ8NI35 1801 aa9.45□□□□□ -0.9
NUP50-217ENST00000491860 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
NUP50-217ENST00000491860 MYMKA6NI61 221 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 KPNA7A9QM74 516 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 HUS1O60921 280 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 MOSPD3O75425 235 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 GCNT3O95395 438 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 IDEP14735 1019 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 GDI1P31150 447 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 CCR2P41597 374 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 MYO1EQ12965 1108 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 LRRC32Q14392 662 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 STK38Q15208 465 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 MGAT5BQ3V5L5 792 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 SLC39A12Q504Y0 691 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 ARHGAP29Q52LW3 1261 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 VITQ6UXI7 678 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 DNAJB7Q7Z6W7 309 aaPredicted RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 TMC8Q8IU68 726 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 BRSK2Q8IWQ3 736 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 SUMF1Q8NBK3 374 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 LEO1Q8WVC0 666 aaPredicted RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 ATRIPQ8WXE1 791 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 FAM3CQ92520 227 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 EXOC4Q96A65 974 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 DNAJC19Q96DA6 116 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 CNTNAP3BQ96NU0 1288 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 PLA2G2FQ9BZM2 168 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 ZCWPW1Q9H0M4 648 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 HEBP1Q9NRV9 189 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 PANK4Q9NVE7 773 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 THG1LQ9NWX6 298 aaKnown RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 ZSCAN32Q9NX65 697 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 UXTQ9UBK9 157 aaPredicted RBP9.44□□□□□ -0.9
NUP50-217ENST00000491860 PCDHB5Q9Y5E4 795 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 TSC2P49815 1807 aa9.44□□□□□ -0.9
NUP50-217ENST00000491860 UBE4BO95155 1302 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 A0A1W2PRU2 124 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 HEPACAM2A8MVW5 462 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 EXTL3O43909 919 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 KRT37O76014 449 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 YEATS4O95619 227 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 OR4Q2P0C623 313 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 PCSK1P29120 753 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 ADSSP30520 456 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 LHX1P48742 406 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 CCR3P51677 355 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 GUCY2FP51841 1108 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 RBP5P82980 135 aa9.43□□□□□ -0.9
NUP50-217ENST00000491860 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
NUP50-217ENST00000491860 AMPD2Q01433 879 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms