RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 BICDL2A1A5D9 508 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 LACTBL1A8MY62 500 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 PODXLO00592 558 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 MAPK13O15264 365 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 TBC1D4O60343 1298 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 EXOC3O60645 756 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 XYLBO75191 536 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 CYP3A5P20815 502 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 PAK1Q13153 545 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 ANGPT1Q15389 498 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 CT47A1Q5JQC4 288 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 FRMD5Q7Z6J6 570 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 HCFC1R1Q9NWW0 138 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 DLGAP2Q9P1A6 1054 aa16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 DNMT3BQ9UBC3 853 aaKnown RBP16.21■□□□□ 0.19
CDC42SE1-205ENST00000491825 XPOTO43592 962 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 TRAPPC3O43617 180 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 NLRP12P59046 1061 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 ROR1Q01973 937 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 ENPEPQ07075 957 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 PSMD6Q15008 389 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 SURF1Q15526 300 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 VARS2Q5ST30 1063 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 ANKRD40Q6AI12 368 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 PHLDB3Q6NSJ2 640 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 TTI2Q6NXR4 508 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 NPAS3Q8IXF0 933 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 NELFBQ8WX92 580 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 MKNK1Q9BUB5 465 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 DACH1Q9UI36 760 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 UBQLN1Q9UMX0 589 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 POLIQ9UNA4 740 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
CDC42SE1-205ENST00000491825 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 SYN3O14994 580 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 SLC16A3O15427 465 aaKnown RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 ABLIM3O94929 683 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 WNT7BP56706 349 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 GPC5P78333 572 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 CYP24A1Q07973 514 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 ADAM9Q13443 819 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 MRPL58Q14197 206 aaKnown RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 TMEM132DQ14C87 1099 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 JADE1Q6IE81 842 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 POTEHQ6S545 545 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 EFCAB13Q8IY85 973 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 AVENQ9NQS1 362 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 CTNND2Q9UQB3 1225 aa16.19■□□□□ 0.18
CDC42SE1-205ENST00000491825 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 CETN3O15182 167 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 AKAP3O75969 853 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 NFICP08651 508 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 LRPAP1P30533 357 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 RPL9P32969 192 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 CASP4P49662 377 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 STARD6P59095 220 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 CLDN10P78369 228 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 SLC5A9Q2M3M2 681 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 MTSS1LQ765P7 747 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 WDR49Q8IV35 697 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 ZNF461Q8TAF7 563 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 SUSD3Q96L08 255 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 CEP63Q96MT8 703 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 DDX23Q9BUQ8 820 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 PDE11AQ9HCR9 933 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 TUBGCP4Q9UGJ1 667 aa16.18■□□□□ 0.18
CDC42SE1-205ENST00000491825 LETM1O95202 739 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 RHOP08100 348 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 GLULP15104 373 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 ATF2P15336 505 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 PSMC2P35998 433 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 SPAG1Q07617 926 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 STX1AQ16623 288 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 INTS8Q75QN2 995 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 USP37Q86T82 979 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 TMEM130Q8N3G9 435 aa16.17■□□□□ 0.18
CDC42SE1-205ENST00000491825 BEST2Q8NFU1 509 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms