RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 TMEM209Q96SK2 561 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 ZCWPW1Q9H0M4 648 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 GDE1Q9NZC3 331 aa16.25■□□□□ 0.19
USP39-217ENST00000491659 HUS1O60921 280 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
USP39-217ENST00000491659 VNN2O95498 520 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 CFHP08603 1231 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 CEBPBP17676 345 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PLA2G5P39877 138 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 TSPY1Q01534 308 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PRSS36Q5K4E3 855 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PARM1Q6UWI2 310 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 C12orf56Q8IXR9 622 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 DCP1BQ8IZD4 617 aaKnown RBP16.24■□□□□ 0.19
USP39-217ENST00000491659 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 KIAA0895Q8NCT3 520 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 C2orf15Q8WU43 125 aaKnown RBP16.24■□□□□ 0.19
USP39-217ENST00000491659 FGF14Q92915 247 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PRRX2Q99811 253 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 CEP72Q9P209 647 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 HSFX1Q9UBD0 423 aa16.24■□□□□ 0.19
USP39-217ENST00000491659 PTPRJQ12913 1337 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 EXOC3O60645 756 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 MICAL2O94851 1124 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
USP39-217ENST00000491659 DLATP10515 647 aaKnown RBP16.23■□□□□ 0.19
USP39-217ENST00000491659 MYL4P12829 197 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 TNNI1P19237 187 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 RFX1P22670 979 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 VCPP55072 806 aaKnown RBP16.23■□□□□ 0.19
USP39-217ENST00000491659 MYL7Q01449 175 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 CYP24A1Q07973 514 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SMARCB1Q12824 385 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 STK4Q13043 487 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 PSMD6Q15008 389 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 KRBA2Q6ZNG9 492 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SIX5Q8N196 739 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 ATAD1Q8NBU5 361 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 ST13P5Q8NFI4 369 aaPredicted RBP16.23■□□□□ 0.19
USP39-217ENST00000491659 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 CXorf38Q8TB03 319 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 CCDC127Q96BQ5 260 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 MCRS1Q96EZ8 462 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 CGRRF1Q99675 332 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SEPT5Q99719 369 aaPredicted RBP16.23■□□□□ 0.19
USP39-217ENST00000491659 RTP3Q9BQQ7 232 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 CRISPLD1Q9H336 500 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 WNT16Q9UBV4 365 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SIX4Q9UIU6 781 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SLC27A5Q9Y2P5 690 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 SNX9Q9Y5X1 595 aa16.23■□□□□ 0.19
USP39-217ENST00000491659 GOLGA6L4A6NEF3 574 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 KIF20AO95235 890 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 AVPR2P30518 371 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
USP39-217ENST00000491659 EPHA5P54756 1037 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 VEPH1Q14D04 833 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 MGAT5BQ3V5L5 792 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 ITIH5Q86UX2 942 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 ADGRF2Q8IZF7 708 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 HS6ST3Q8IZP7 471 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 TOP6BLQ8N6T0 577 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 FLCNQ8NFG4 579 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 SPATA18Q8TC71 538 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 FAM200AQ8TCP9 573 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 SPPL2BQ8TCT7 592 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 TCEAL4Q96EI5 215 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 HPDLQ96IR7 371 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 KXD1Q9BQD3 176 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 GOLPH3LQ9H4A5 285 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 GDAP2Q9NXN4 497 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
USP39-217ENST00000491659 L1RE1Q9UN81 338 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 ASB3Q9Y575 518 aa16.22■□□□□ 0.19
USP39-217ENST00000491659 NUP210Q8TEM1 1887 aaPredicted RBP16.21■□□□□ 0.19
USP39-217ENST00000491659 ZNF202O95125 648 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 CCR2P41597 374 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
USP39-217ENST00000491659 ASTLQ6HA08 431 aaPredicted RBP16.21■□□□□ 0.19
USP39-217ENST00000491659 TTC9BQ8N6N2 239 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 GPR152Q8TDT2 470 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 PSMG2Q969U7 264 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 RPP25Q9BUL9 199 aaKnown RBP16.21■□□□□ 0.19
USP39-217ENST00000491659 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 SLC2A4RGQ9NR83 387 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
USP39-217ENST00000491659 CA14Q9ULX7 337 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
USP39-217ENST00000491659 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 PDXKO00764 312 aa16.2■□□□□ 0.18
USP39-217ENST00000491659 ECI2O75521 394 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms