RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 TXLNGYQ9BZA5 131 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 CCDC134Q9H6E4 229 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 RPF1Q9H9Y2 349 aaKnown RBP6.72□□□□□ -1.33
FN1-223ENST00000490833 VTA1Q9NP79 307 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 GPRC5CQ9NQ84 441 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 PRDM9Q9NQV7 894 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 XPNPEP1Q9NQW7 623 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 ST7Q9NRC1 585 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 ZDHHC18Q9NUE0 388 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 GGA3Q9NZ52 723 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 TNFSF13BQ9Y275 285 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 RIPK3Q9Y572 518 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 NFS1Q9Y697 457 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 DOCK1Q14185 1865 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 ADGRA2Q96PE1 1338 aa6.72□□□□□ -1.33
FN1-223ENST00000490833 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
FN1-223ENST00000490833 GSTTP1A0A1W2PQM5 241 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TTC24A2A3L6 582 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 GOLGA8JA6NMD2 632 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ZNF487B1APH4 448 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 MYO1CO00159 1063 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TLR3O15455 904 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 MEFVO15553 781 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 TRAPPC3O43617 180 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SORBS3O60504 671 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CDH16O75309 829 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SPAG6O75602 509 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TTC4O95801 387 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TFRCP02786 760 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 HMGCRP04035 888 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ERBB2P04626 1255 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PRKCBP05771 671 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 FAM153BP0C7A2 387 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SETSIPP0DME0 302 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PYGMP11217 842 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ECHS1P30084 290 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 AXLP30530 894 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 GBP2P32456 591 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 TCF7P36402 384 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 ADCY8P40145 1251 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PTGIRP43119 386 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ZNF844Q08AG5 666 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 LAMTOR4Q0VGL1 99 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 MYO1EQ12965 1108 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SNAPC2Q13487 334 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 MAMLD1Q13495 774 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TFDP2Q14188 446 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 MORF4L2Q15014 288 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PTGISQ16647 500 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 FAM153CQ494X1 144 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 FAM47CQ5HY64 1035 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ZNF667Q5HYK9 610 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 DNAJC24Q6P3W2 148 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TMEM270Q6UE05 265 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SEPT14Q6ZU15 432 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CCDC121Q6ZUS5 278 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 BZW1Q7L1Q6 419 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 MON1BQ7L1V2 547 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 GSTA5Q7RTV2 222 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 ZNF410Q86VK4 478 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CACNA2D3Q8IZS8 1091 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 RBBP8NLQ8NC74 664 aaPredicted RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 TSEN2Q8NCE0 465 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 SLC20A1Q8WUM9 679 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PRPF31Q8WWY3 499 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 ZNF606Q8WXB4 792 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PIK3R5Q8WYR1 880 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ALG3Q92685 438 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SEMA4DQ92854 862 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TLCD1Q96CP7 247 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ARHGEF26Q96DR7 871 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CHMP6Q96FZ7 201 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 SGSM3Q96HU1 749 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CABS1Q96KC9 395 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CCT8L2Q96SF2 557 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 PCDHB18PQ96TA0 734 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 MMP19Q99542 508 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 TACO1Q9BSH4 297 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 OSBPL8Q9BZF1 889 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CENPHQ9H3R5 247 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 FZD8Q9H461 694 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 ASNSD1Q9NWL6 643 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 BCCIPQ9P287 314 aaKnown RBP eCLIP6.71□□□□□ -1.34
FN1-223ENST00000490833 ASIC3Q9UHC3 531 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 FAM153AQ9UHL3 310 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 CPSF3Q9UKF6 684 aaKnown RBP6.71□□□□□ -1.34
FN1-223ENST00000490833 COG5Q9UP83 839 aa6.71□□□□□ -1.34
FN1-223ENST00000490833 C2CD2Q9Y426 696 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms