RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	C14orf80	Q86SX3	495 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	FAM90A1	Q86YD7	464 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	SDR16C5	Q8N3Y7	309 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	SAMD3	Q8N6K7	520 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	C1orf131	Q8NDD1	294 aa	Known RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	IL17RD	Q8NFM7	739 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	OR10H5	Q8NGA6	315 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TTC8	Q8TAM2	541 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	PPP1R35	Q8TAP8	253 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	SECISBP2L	Q93073	1101 aa	Known RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	RGMA	Q96B86	450 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	C1GALT1C1	Q96EU7	318 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ACO2	Q99798	780 aa	Known RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	VRK1	Q99986	396 aa	Predicted RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ARPC5L	Q9BPX5	153 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TEX101	Q9BY14	249 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	C11orf54	Q9H0W9	315 aa	Predicted RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	AKIP1	Q9NQ31	210 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	NRBP1	Q9UHY1	535 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ANAPC4	Q9UJX5	808 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	INSL6	Q9Y581	213 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TCRBV7S2A1N4T	A0A589	114 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	DNAJC9-AS1	A6NH13	148 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	MARCH11	A6NNE9	402 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	DTNB	O60941	627 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	SLC43A1	O75387	559 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	TUSC2	O75896	110 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	NCR1	O76036	304 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	UBXN7	O94888	489 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	FGA	P02671	866 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	HLA-DOA	P06340	250 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	CT47B1	P0C2W7	299 aa	Predicted RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	HSPA6	P17066	643 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	PRDX5	P30044	214 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	AGFG1	P52594	562 aa	Known RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	CHN2	P52757	468 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	ELL	P55199	621 aa	Predicted RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	FAM193A	P78312	1265 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	SLFN5	Q08AF3	891 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	RAPGEF1	Q13905	1077 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	MAPRE1	Q15691	268 aa	Known RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	PABPC1L	Q4VXU2	614 aa	Known RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	KLHL22	Q53GT1	634 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	AGAP9	Q5VTM2	703 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	ICE2	Q659A1	982 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	EFCAB12	Q6NXP0	572 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	SLC4A10	Q6U841	1118 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	UBE3B	Q7Z3V4	1068 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	RSPH3	Q86UC2	560 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	COL23A1	Q86Y22	540 aa	Predicted RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	ARHGEF19	Q8IW93	802 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	GRAMD1C	Q8IYS0	662 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	MYO1H	Q8N1T3	1032 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	ZBTB34	Q8NCN2	500 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	C3orf20	Q8ND61	904 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	ZFP28	Q8NHY6	868 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	LRGUK	Q96M69	825 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	MAP3K14	Q99558	947 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	CGRRF1	Q99675	332 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	RSAD1	Q9HA92	442 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	SPON1	Q9HCB6	807 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	CASS4	Q9NQ75	786 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	VSX1	Q9NZR4	365 aa	Predicted RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	DKK2	Q9UBU2	259 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	DDX20	Q9UHI6	824 aa	Known RBP	3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	SLC45A2	Q9UMX9	530 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444	PCDHA3	Q9Y5H8	950 aa		3.07	□□□□□ -1.92
PUM3-204	ENST00000490444		A0A088AWK7	358 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	DIRC3	C9JPN6	131 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	TBX3	O15119	743 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	MATN4	O95460	622 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	POMC	P01189	267 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	FTL	P02792	175 aa	Predicted RBP	3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	CD1A	P06126	327 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	ELANE	P08246	267 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	FTH1P19	P0C7X4	201 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	SPATA31D3	P0C874	917 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	HKR1	P10072	659 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	TYR	P14679	529 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	ATF3	P18847	181 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	GCSH	P23434	173 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	BMPR1A	P36894	532 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	RNASE9	P60153	205 aa	Known RBP	3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	RAP2B	P61225	183 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	GUCY1B3	Q02153	619 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	NHLH2	Q02577	135 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	GBX1	Q14549	363 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	MINDY4	Q4G0A6	757 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	SWSAP1	Q6NVH7	229 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	SPATA31D4	Q6ZUB0	917 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	CHST15	Q7LFX5	561 aa	Predicted RBP	3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	HEATR3	Q7Z4Q2	680 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	PPP1R3B	Q86XI6	285 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	CREBRF	Q8IUR6	639 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	DENND1C	Q8IV53	801 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	RHOT2	Q8IXI1	618 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	KIAA0319L	Q8IZA0	1049 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	FAM98A	Q8NCA5	519 aa	Known RBP	3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	COQ10A	Q96MF6	247 aa		3.06	□□□□□ -1.92
PUM3-204	ENST00000490444	C1orf43	Q9BWL3	253 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms