RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SPEGQ15772 3267 aa8.94□□□□□ -0.98
USP39-216ENST00000490193 CCDC169A6NNP5 214 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 TOM1L1O75674 476 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 MARCKSP29966 332 aaPredicted RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 CCT6AP40227 531 aaKnown RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 EPHB3P54753 998 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 DUSP4Q13115 394 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 MAPK7Q13164 816 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 DMP1Q13316 513 aaPredicted RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 MYBPC2Q14324 1141 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 PDIA5Q14554 519 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 PON2Q15165 354 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 SF3A2Q15428 464 aaKnown RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 ZBTB6Q15916 424 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 STXBP5Q5T5C0 1151 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 STPG1Q5TH74 334 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 CENPPQ6IPU0 288 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 GAREM2Q75VX8 874 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 CACNA2D4Q7Z3S7 1137 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 HAUS6Q7Z4H7 955 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 NECAB1Q8N987 351 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 C12orf50Q8NA57 414 aaPredicted RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 FAM200AQ8TCP9 573 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 PSMG2Q969U7 264 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 ZC3H10Q96K80 434 aaKnown RBP8.93□□□□□ -0.98
USP39-216ENST00000490193 DRC1Q96MC2 740 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 ARRDC1-AS1Q9H2J1 176 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 PLEKHA5Q9HAU0 1116 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 KMT5AQ9NQR1 393 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 TUBGCP4Q9UGJ1 667 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 MYO16Q9Y6X6 1858 aa8.93□□□□□ -0.98
USP39-216ENST00000490193 SDK1Q7Z5N4 2213 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ZNF638Q14966 1978 aaKnown RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 TTC26A0AVF1 554 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 MTMR11A4FU01 709 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 DPYSL4O14531 572 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 AXIN1O15169 862 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 EXTL3O43909 919 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 JAK2O60674 1132 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 HIP1RO75146 1068 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 RPP40O75818 363 aaKnown RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 PRAMEF12O95522 483 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 PROS1P07225 676 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 TYMPP19971 482 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 CYP3A5P20815 502 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 HOXC13P31276 330 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ALDH1A3P47895 512 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 MCL1Q07820 350 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 NOLC1Q14978 699 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP39-216ENST00000490193 ITPRIPL2Q3MIP1 535 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ARHGAP15Q53QZ3 475 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 TMEM196Q5HYL7 178 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ZPBP2Q6X784 338 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 DNAJB7Q7Z6W7 309 aaPredicted RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 C4orf32Q8N8J7 132 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 IGSF22Q8N9C0 903 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 BPIFB1Q8TDL5 484 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 SPIRE2Q8WWL2 714 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 KCNN1Q92952 543 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ZFYVE19Q96K21 471 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ZBTB45Q96K62 511 aaPredicted RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 PGLYRP2Q96PD5 576 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 TMEM209Q96SK2 561 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 TCHPQ9BT92 498 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 TIPINQ9BVW5 301 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 LSM14BQ9BX40 385 aaKnown RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 FOXP1Q9H334 677 aaPredicted RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 TASP1Q9H6P5 420 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 RXFP3Q9NSD7 469 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 DDX19AQ9NUU7 478 aaKnown RBP8.92□□□□□ -0.98
USP39-216ENST00000490193 LRWD1Q9UFC0 647 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 KCNG1Q9UIX4 513 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ZMYM5Q9UJ78 669 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 KIAA1024Q9UPX6 916 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 NUP205Q92621 2012 aa8.92□□□□□ -0.98
USP39-216ENST00000490193 ATG13O75143 517 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 KCNK5O95279 499 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 ADRB2P07550 413 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 CLTAP09496 248 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 OR4Q2P0C623 313 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 CXCL8P10145 99 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 PAX3P23760 479 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 GUCY2CP25092 1073 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 GABRR2P28476 465 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 MPLP40238 635 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TRAPPC10P48553 1259 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 MCM2P49736 904 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TNK2Q07912 1038 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 ST3GAL1Q11201 340 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 PTPAQ15257 358 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 SAFBQ15424 915 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP39-216ENST00000490193 ZNF174Q15697 407 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 TTC38Q5R3I4 469 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 GPR158Q5T848 1215 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 OVOS1Q6IE37 1185 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 RINT1Q6NUQ1 792 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 PKN3Q6P5Z2 889 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 C1orf186Q6ZWK4 172 aa8.91□□□□□ -0.98
USP39-216ENST00000490193 USP37Q86T82 979 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms