RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 SPEM2Q0P670 501 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 PTPAQ15257 358 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 RABEP1Q15276 862 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 LPAL2Q16609 132 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 ARSHQ5FYA8 562 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 GPR158Q5T848 1215 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 TMC8Q8IU68 726 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 HAPLN2Q9GZV7 340 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 DNAJC25Q9H1X3 360 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 OBP2AQ9NY56 170 aa12.92□□□□□ -0.34
SFXN3-207ENST00000489434 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
SFXN3-207ENST00000489434 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 COL4A2P08572 1712 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 SDK1Q7Z5N4 2213 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 TRAK2O60296 914 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 FAM189A1O60320 539 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 PAPSS2O95340 614 aaPredicted RBP12.91□□□□□ -0.34
SFXN3-207ENST00000489434 ADRB2P07550 413 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 CTHP32929 405 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 SMARCB1Q12824 385 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 GAREM2Q75VX8 874 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
SFXN3-207ENST00000489434 SYNPOQ8N3V7 929 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 C2orf15Q8WU43 125 aaKnown RBP12.91□□□□□ -0.34
SFXN3-207ENST00000489434 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 KIF2CQ99661 725 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 CRISPLD1Q9H336 500 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 ASB7Q9H672 318 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
SFXN3-207ENST00000489434 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 SOAT2O75908 522 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 CYP11A1P05108 521 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 TGM1P22735 817 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 WEE1P30291 646 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 SOX9P48436 509 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 FNTBP49356 437 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 ZNF131P52739 623 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 ITPRIPL2Q3MIP1 535 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
SFXN3-207ENST00000489434 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 CEP68Q76N32 757 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 LONP2Q86WA8 852 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 GPIHBP1Q8IV16 184 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 NETO1Q8TDF5 533 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 BPIFB1Q8TDL5 484 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 PARD6AQ9NPB6 346 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
SFXN3-207ENST00000489434 C2CD2Q9Y426 696 aa12.9□□□□□ -0.34
SFXN3-207ENST00000489434 NUP210Q8TEM1 1887 aaPredicted RBP12.9□□□□□ -0.34
SFXN3-207ENST00000489434 NCANO14594 1321 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ANK1P16157 1881 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 PIRO00625 290 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 CYB561D2O14569 222 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 PPEF2O14830 753 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 NFICP08651 508 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 GJB2P29033 226 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 HOXA6P31267 233 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 LONP1P36776 959 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 MCM2P49736 904 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ACOT2P49753 483 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 TAF6P49848 677 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 GTF2BQ00403 316 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 AMPD2Q01433 879 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 POU5F1Q01860 360 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 GAS6Q14393 721 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 PON2Q15165 354 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 DCP1BQ8IZD4 617 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 TTC9BQ8N6N2 239 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 TTC8Q8TAM2 541 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 SPPL2BQ8TCT7 592 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 RAD54LQ92698 747 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 PYM1Q9BRP8 204 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 RBM12Q9NTZ6 932 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 DPP3Q9NY33 737 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 TCHHQ07283 1943 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 SCN1AP35498 2009 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 SPAG17Q6Q759 2223 aa12.89□□□□□ -0.35
SFXN3-207ENST00000489434 ZNF638Q14966 1978 aaKnown RBP12.89□□□□□ -0.35
SFXN3-207ENST00000489434 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms