RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 EFCAB8A8MWE9 144 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CLIC2O15247 247 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 KRT86O43790 486 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 IPO7O95373 1038 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CETPP11597 493 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PRLRP16471 622 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 FSTP19883 344 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 RAB6AP20340 208 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 MAP4P27816 1152 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ADSSP30520 456 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ARL2P36404 184 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 NAMPTP43490 491 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 GJA8P48165 433 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 GCLCP48506 637 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 FMO5P49326 533 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SLC26A2P50443 739 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PEX3P56589 373 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 POLR2FP61218 127 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 RPS26P62854 115 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PTPN11Q06124 597 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 FSTL1Q12841 308 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PRKG1Q13976 671 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SEPT6Q14141 434 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PLS1Q14651 629 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SPA17Q15506 151 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SLC18A3Q16572 532 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 WHAMMP3Q1A5X7 153 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 EPC2Q52LR7 807 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 HP1BP3Q5SSJ5 553 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 C1orf220Q5T0J3 134 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SFMBT2Q5VUG0 894 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PLA2G4FQ68DD2 849 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SWSAP1Q6NVH7 229 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 BNC2Q6ZN30 1099 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 RSRC2Q7L4I2 434 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PLPPR4Q7Z2D5 763 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ZNF572Q7Z3I7 529 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CACNA2D4Q7Z3S7 1137 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CREBRFQ8IUR6 639 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 EXOC8Q8IYI6 725 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SHISA5Q8N114 240 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SLC35F6Q8N357 371 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 SLC43A3Q8NBI5 491 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 XXYLT1Q8NBI6 393 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 OLIG1Q8TAK6 271 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ZNF526Q8TF50 670 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 UBE2Q2Q8WVN8 375 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ATRIPQ8WXE1 791 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 JAKMIP2Q96AA8 810 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CEP170P1Q96L14 293 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 MFSD14AQ96MC6 490 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CCDC43Q96MW1 224 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 NAPGQ99747 312 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 EMILIN2Q9BXX0 1053 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 STK33Q9BYT3 514 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PORCNQ9H237 461 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ATP6V0A4Q9HBG4 840 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 KIAA1586Q9HCI6 787 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 LUC7LQ9NQ29 371 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ZNF302Q9NR11 478 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 KRT82Q9NSB4 513 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 CACNA2D2Q9NY47 1150 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 UBP1Q9NZI7 540 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 HSPBP1Q9NZL4 362 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 INTUQ9ULD6 942 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 DIS3Q9Y2L1 958 aaKnown RBP6.01□□□□□ -1.45
ATG4A-208ENST00000489247 RNF114Q9Y508 228 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 PCDHA13Q9Y5I0 950 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 LCTP09848 1927 aa6.01□□□□□ -1.45
ATG4A-208ENST00000489247 ADGRA3Q8IWK6 1321 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 LRRC37A2A6NM11 1700 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 A0A0A6YYK5 440 aaPredicted RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 TMEM150BA6NC51 233 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ASB14A6NK59 587 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 SLC16A4O15374 487 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 STRNO43815 780 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 EXOC3O60645 756 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 MAFO75444 373 aaPredicted RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 PLEKP08567 350 aaPredicted RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 ZBTB48P10074 688 aaPredicted RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 KRT13P13646 458 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 H2AFXP16104 143 aaPredicted RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 FERP16591 822 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 SLC9A1P19634 815 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 CNGA1P29973 690 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ASPAP45381 313 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 VAMP7P51809 220 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 GTF2A2P52657 109 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 CCNA1P78396 465 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ITIH3Q06033 890 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 KIF5AQ12840 1032 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 KCTD2Q14681 263 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 EMC2Q15006 297 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 TCEAL1Q15170 157 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ASIC2Q16515 512 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ZNF792Q3KQV3 632 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 ZNF569Q5MCW4 686 aa6□□□□□ -1.45
ATG4A-208ENST00000489247 CELF3Q5SZQ8 465 aaKnown RBP6□□□□□ -1.45
ATG4A-208ENST00000489247 FAM102BQ5T8I3 360 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms