RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 BFSP1Q12934 665 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 CENPPQ6IPU0 288 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 FMR1NBQ8N0W7 255 aaPredicted RBP25.82■■□□□ 1.72
PTPN18-213ENST00000489215 TOP6BLQ8N6T0 577 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 CXorf38Q8TB03 319 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 FGF13Q92913 245 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 CGRRF1Q99675 332 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 KCTD10Q9H3F6 313 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 GDE1Q9NZC3 331 aa25.82■■□□□ 1.72
PTPN18-213ENST00000489215 TECTAO75443 2155 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 OR4Q2P0C623 313 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 LHX1P48742 406 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 NTHL1P78549 312 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 MYL7Q01449 175 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 TSPY1Q01534 308 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 FAM160A1Q05DH4 1040 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 DUSP4Q13115 394 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 HFE2Q6ZVN8 426 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 PDZD4Q76G19 769 aaPredicted RBP25.81■■□□□ 1.72
PTPN18-213ENST00000489215 TRAPPC11Q7Z392 1133 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 SUGP1Q8IWZ8 645 aaKnown RBP25.81■■□□□ 1.72
PTPN18-213ENST00000489215 OR5B17Q8NGF7 314 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 SPPL2BQ8TCT7 592 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 CCDC127Q96BQ5 260 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 HPDLQ96IR7 371 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 TIGD1Q96MW7 591 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 PGLYRP2Q96PD5 576 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 ACBD6Q9BR61 282 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 CORO1BQ9BR76 489 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 DMAC2Q9NW81 257 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 HCFC1R1Q9NWW0 138 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 SIX4Q9UIU6 781 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 DUSP12Q9UNI6 340 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 TRAF3IP3Q9Y228 551 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 SNX9Q9Y5X1 595 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 DOCK6Q96HP0 2047 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 TSC2P49815 1807 aa25.81■■□□□ 1.72
PTPN18-213ENST00000489215 MTMR11A4FU01 709 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 ANHXE9PGG2 379 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 NFE2Q16621 373 aaPredicted RBP25.8■■□□□ 1.72
PTPN18-213ENST00000489215 GUF1Q8N442 669 aaKnown RBP25.8■■□□□ 1.72
PTPN18-213ENST00000489215 OR10T2Q8NGX3 314 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 ASIC4Q96FT7 647 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 KCNH6Q9H252 994 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 ASAH2Q9NR71 780 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 FRMD4BQ9Y2L6 1034 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 YIPF1Q9Y548 306 aa25.8■■□□□ 1.72
PTPN18-213ENST00000489215 FAM163BP0C2L3 166 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 PRR29P0C7W0 189 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 RPL13P26373 211 aaKnown RBP25.79■■□□□ 1.72
PTPN18-213ENST00000489215 NFIL3Q16649 462 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 SLC39A12Q504Y0 691 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 LMBRD2Q68DH5 695 aaPredicted RBP25.79■■□□□ 1.72
PTPN18-213ENST00000489215 ITIH5Q86UX2 942 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 PDCL2Q8N4E4 241 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 SLC44A3Q8N4M1 653 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 ITFG1Q8TB96 612 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 GSDMAQ96QA5 445 aa25.79■■□□□ 1.72
PTPN18-213ENST00000489215 SMC2O95347 1197 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 FGF19O95750 216 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 NR3C1P04150 777 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 PCSK1P29120 753 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 TRPC3Q13507 836 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 FBXL6Q8N531 539 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 ATAD1Q8NBU5 361 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 GPR88Q9GZN0 384 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 DDX43Q9NXZ2 648 aaKnown RBP25.78■■□□□ 1.72
PTPN18-213ENST00000489215 CEP72Q9P209 647 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 L1RE1Q9UN81 338 aa25.78■■□□□ 1.72
PTPN18-213ENST00000489215 NOTCH4Q99466 2003 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 MAPK13O15264 365 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 ATICP31939 592 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 EPHA5P54756 1037 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 SNW1Q13573 536 aaKnown RBP25.77■■□□□ 1.72
PTPN18-213ENST00000489215 HTR4Q13639 388 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 VEPH1Q14D04 833 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 NPAS3Q8IXF0 933 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 ELOA2Q8IYF1 753 aaPredicted RBP25.77■■□□□ 1.72
PTPN18-213ENST00000489215 ENGASEQ8NFI3 743 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 PARD3BQ8TEW8 1205 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 TMEM209Q96SK2 561 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 RTP3Q9BQQ7 232 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 PCDHB5Q9Y5E4 795 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 PTPRJQ12913 1337 aa25.77■■□□□ 1.72
PTPN18-213ENST00000489215 PHACTR2O75167 634 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 VNN2O95498 520 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 STAU1O95793 577 aaKnown RBP25.76■■□□□ 1.71
PTPN18-213ENST00000489215 SRFP11831 508 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 CLDN10P78369 228 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 PRSS36Q5K4E3 855 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 ADGRF2Q8IZF7 708 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 SYAP1Q96A49 352 aaPredicted RBP25.76■■□□□ 1.71
PTPN18-213ENST00000489215 PRRX2Q99811 253 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 WNT16Q9UBV4 365 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 SLC27A5Q9Y2P5 690 aa25.76■■□□□ 1.71
PTPN18-213ENST00000489215 GABRDO14764 452 aa25.75■■□□□ 1.71
PTPN18-213ENST00000489215 IKBKBO14920 756 aa25.75■■□□□ 1.71
PTPN18-213ENST00000489215 SOWAHAQ2M3V2 549 aa25.75■■□□□ 1.71
PTPN18-213ENST00000489215 MGAT5BQ3V5L5 792 aa25.75■■□□□ 1.71
PTPN18-213ENST00000489215 TMC2Q8TDI7 906 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms