RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 TRIM43Q96BQ3 446 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 ZSWIM1Q9BR11 485 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 ELOVL4Q9GZR5 314 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 LHX5Q9H2C1 402 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 ACP6Q9NPH0 428 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
TOP3A-206ENST00000489131 TSC2P49815 1807 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 COL4A6Q14031 1691 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 MED7O43513 233 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 CYP11A1P05108 521 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 VDRP11473 427 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 CD58P19256 250 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 RAP1GAPP47736 663 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 CLCNKBP51801 687 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 NDST1P52848 882 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 CDH8P55286 799 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 NOMO3P69849 1222 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 IKBKEQ14164 716 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 ACAD10Q6JQN1 1059 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 DCLRE1AQ6PJP8 1040 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM86AQ8N2M4 240 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 APPL2Q8NEU8 664 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-206ENST00000489131 CASD1Q96PB1 797 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
TOP3A-206ENST00000489131 NT5C1AQ9BXI3 368 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 MRPL9Q9BYD2 267 aaKnown RBP13.67□□□□□ -0.22
TOP3A-206ENST00000489131 DNAI2Q9GZS0 605 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 LZTFL1Q9NQ48 299 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
TOP3A-206ENST00000489131 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 ARHGEF37A1IGU5 675 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 M0QZQ0 153 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 KIF5CO60282 957 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 MTA2O94776 668 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 BAIAP3O94812 1187 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 ABL1P00519 1130 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 POMCP01189 267 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 MYBL1P10243 752 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 TNNT1P13805 278 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 ITGB8P26012 769 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 GALCP54803 685 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 CNGA2Q16280 664 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 ARHGAP17Q68EM7 881 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-206ENST00000489131 PDCL2Q8N4E4 241 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 TFAP2BQ92481 460 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 MMS19Q96T76 1030 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 PACSIN1Q9BY11 444 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 TAS2R14Q9NYV8 317 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 PCDHGC5Q9Y5F6 944 aa13.66□□□□□ -0.22
TOP3A-206ENST00000489131 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 O00370 1275 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 THAP12O43422 761 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 HUS1O60921 280 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 CLSTN1O94985 981 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 FGFR1P11362 822 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 EN2P19622 333 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 GSCP56915 257 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 LCLAT1Q6UWP7 414 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 ADGRF2Q8IZF7 708 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM199Q8N511 208 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TRIM58Q8NG06 486 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 RFFLQ8WZ73 363 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TRIM11Q96F44 468 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 SENP8Q96LD8 212 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 PAAF1Q9BRP4 392 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 AVENQ9NQS1 362 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 GTF3C4Q9UKN8 822 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 DSEQ9UL01 958 aa13.65□□□□□ -0.22
TOP3A-206ENST00000489131 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.65□□□□□ -0.22
TOP3A-206ENST00000489131 CYB561D2O14569 222 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 FANCGO15287 622 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 B4GALT3O60512 393 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 DDHD2O94830 711 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 CYP1A2P05177 515 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 RAG1P15918 1043 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 TYMPP19971 482 aa13.64□□□□□ -0.23
TOP3A-206ENST00000489131 MMP8P22894 467 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms