RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 NPAS4Q8IUM7 802 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 PASD1Q8IV76 773 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 ADGRF2Q8IZF7 708 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 TOP6BLQ8N6T0 577 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 TRIM11Q96F44 468 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 TMEM176AQ96HP8 235 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 FAM193BQ96PV7 902 aaPredicted RBP10.67□□□□□ -0.7
USP11-211ENST00000489111 PCDHB18PQ96TA0 734 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 MRPL45Q9BRJ2 306 aaKnown RBP10.67□□□□□ -0.7
USP11-211ENST00000489111 ELOVL4Q9GZR5 314 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 TAS2R14Q9NYV8 317 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 HMGXB4Q9UGU5 601 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 PAXBP1Q9Y5B6 917 aa10.67□□□□□ -0.7
USP11-211ENST00000489111 RALGAPA2Q2PPJ7 1873 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 NCANO14594 1321 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 FAM170AA1A519 330 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ARHGEF37A1IGU5 675 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 BTNL10A8MVZ5 291 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 A8MXQ7 604 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 CYB561D2O14569 222 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 KIAA0355O15063 1070 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 MOCS3O95396 460 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 VDRP11473 427 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ODC1P11926 461 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 NOP2P46087 812 aaKnown RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 IKBKEQ14164 716 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 SOWAHAQ2M3V2 549 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 UNC93AQ86WB7 457 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 SLC35F6Q8N357 371 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 TMEM199Q8N511 208 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 RNF10Q8N5U6 811 aaKnown RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 SLC4A11Q8NBS3 891 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 TMEM35BQ8NCS4 154 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 MSANTD4Q8NCY6 345 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ZNF606Q8WXB4 792 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 RSPH1Q8WYR4 309 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 RFFLQ8WZ73 363 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 MRPL9Q9BYD2 267 aaKnown RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 ISCUQ9H1K1 167 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 CACNG4Q9UBN1 327 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 PRKAG2Q9UGJ0 569 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 KIAA1257Q9ULG3 409 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 DUSP10Q9Y6W6 482 aa10.66□□□□□ -0.7
USP11-211ENST00000489111 TRIP12Q14669 1992 aaPredicted RBP10.66□□□□□ -0.7
USP11-211ENST00000489111 CENPFP49454 3210 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 A0A0A6YYK5 440 aaPredicted RBP10.65□□□□□ -0.7
USP11-211ENST00000489111 CTAGE9A4FU28 777 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 BUB1O43683 1085 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 B3GAT3O94766 335 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 ABL1P00519 1130 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TIMP1P01033 207 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 MYBL1P10243 752 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 WARSP23381 471 aaKnown RBP10.65□□□□□ -0.7
USP11-211ENST00000489111 SSTR3P32745 418 aaPredicted RBP10.65□□□□□ -0.7
USP11-211ENST00000489111 GNL1P36915 607 aaPredicted RBP10.65□□□□□ -0.7
USP11-211ENST00000489111 GPC5P78333 572 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 CENPCQ03188 943 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 STILQ15468 1287 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 UPP1Q16831 310 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TCTN1Q2MV58 587 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 LIN9Q5TKA1 542 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 DPH6Q7L8W6 267 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 METTL23Q86XA0 190 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 DNAAF5Q86Y56 855 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TMEM86AQ8N2M4 240 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 PDCL2Q8N4E4 241 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 WHAMMQ8TF30 809 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 CPA5Q8WXQ8 436 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TFAP2BQ92481 460 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 CYFIP2Q96F07 1278 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TNIP3Q96KP6 325 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 SENP8Q96LD8 212 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TWNKQ96RR1 684 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 WDR24Q96S15 920 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 NAPGQ99747 312 aaPredicted RBP10.65□□□□□ -0.7
USP11-211ENST00000489111 THAP2Q9H0W7 228 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 TBC1D13Q9NVG8 400 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 GTF3C4Q9UKN8 822 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 DSEQ9UL01 958 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 PCDHGC3Q9UN70 934 aa10.65□□□□□ -0.7
USP11-211ENST00000489111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.64□□□□□ -0.71
USP11-211ENST00000489111 TRIM43BA6NCK2 446 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 TBKBP1A7MCY6 615 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 M0QYV0 167 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 O00370 1275 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 EFCAB14O75071 495 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 AMHP03971 560 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 CYP1A1P04798 512 aaPredicted RBP10.64□□□□□ -0.71
USP11-211ENST00000489111 CALB1P05937 261 aa10.64□□□□□ -0.71
USP11-211ENST00000489111 PFKMP08237 780 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms