RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TWF1Q12792 350 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 BIRC3Q13489 604 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 SLC39A12Q504Y0 691 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 CYP4A22Q5TCH4 519 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 DPH6Q7L8W6 267 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 ELOA2Q8IYF1 753 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-218ENST00000489037 UBALD2Q8IYN6 164 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 TOP6BLQ8N6T0 577 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 SPATA18Q8TC71 538 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 C2orf15Q8WU43 125 aaKnown RBP15.35■□□□□ 0.05
BRCA1-218ENST00000489037 NXPE3Q969Y0 559 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 EPS15L1Q9UBC2 864 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 DNMT3BQ9UBC3 853 aaKnown RBP15.35■□□□□ 0.05
BRCA1-218ENST00000489037 SIX4Q9UIU6 781 aa15.35■□□□□ 0.05
BRCA1-218ENST00000489037 MRPS23Q9Y3D9 190 aaKnown RBP15.35■□□□□ 0.05
BRCA1-218ENST00000489037 NOTCH4Q99466 2003 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 KRT13P13646 458 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 NR2F2P24468 414 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 TUFMP49411 452 aaKnown RBP15.34■□□□□ 0.05
BRCA1-218ENST00000489037 NTHL1P78549 312 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 DUSP4Q13115 394 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 STIM1Q13586 685 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 NFIL3Q16649 462 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 ZNF658Q5TYW1 1059 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-218ENST00000489037 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 LEMD2Q8NC56 503 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 FAM84AQ96KN4 292 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 MYADMQ96S97 322 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 MMS19Q96T76 1030 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 TSG101Q99816 390 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 CORO1BQ9BR76 489 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 ZCWPW1Q9H0M4 648 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 HCFC1R1Q9NWW0 138 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 HSFX1Q9UBD0 423 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 CDH7Q9ULB5 785 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 L1RE1Q9UN81 338 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 PTPRJQ12913 1337 aa15.34■□□□□ 0.05
BRCA1-218ENST00000489037 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 FAM86C2PA6NEL3 165 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 PRR33A8MZF0 331 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 MAPK13O15264 365 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ASGR2P07307 311 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 RHOP08100 348 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 LAMP2P13473 410 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 PCSK1P29120 753 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ATICP31939 592 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 TNNC1P63316 161 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 SIGLEC14Q08ET2 396 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ADAM9Q13443 819 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 NFE2Q16621 373 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-218ENST00000489037 TRIM67Q6ZTA4 783 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 PDZD4Q76G19 769 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ADGRF2Q8IZF7 708 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 OR10T2Q8NGX3 314 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 CXorf38Q8TB03 319 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 SPPL2BQ8TCT7 592 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 TMC2Q8TDI7 906 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 SYAP1Q96A49 352 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-218ENST00000489037 TMEM209Q96SK2 561 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ACBD6Q9BR61 282 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 LRFN3Q9BTN0 628 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 KCNK12Q9HB15 430 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 AVENQ9NQS1 362 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ASAH2Q9NR71 780 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 DDX43Q9NXZ2 648 aaKnown RBP15.33■□□□□ 0.04
BRCA1-218ENST00000489037 SLC27A5Q9Y2P5 690 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 YIPF1Q9Y548 306 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 ASB3Q9Y575 518 aa15.33■□□□□ 0.04
BRCA1-218ENST00000489037 TECTAO75443 2155 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 CETN3O15182 167 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 GADD45BO75293 160 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 CST3P01034 146 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 PSMC2P35998 433 aaKnown RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 PPP1R2P41236 205 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 CASP4P49662 377 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 UBE2HP62256 183 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 TDGQ13569 410 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 VEPH1Q14D04 833 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 TAF12Q16514 161 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 EDRF1Q3B7T1 1238 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 MGAT5BQ3V5L5 792 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 INTS8Q75QN2 995 aaKnown RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 MTSS1LQ765P7 747 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 ITIH5Q86UX2 942 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 SMYD4Q8IYR2 804 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 ATAD1Q8NBU5 361 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 FGF13Q92913 245 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 SEPT5Q99719 369 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-218ENST00000489037 SNX25Q9H3E2 840 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 PCDHB5Q9Y5E4 795 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 MUC3AQ02505 3323 aa15.32■□□□□ 0.04
BRCA1-218ENST00000489037 TMEM221A6NGB7 291 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 LRRIQ3A6PVS8 624 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-218ENST00000489037 M0R296 226 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 IKBKBO14920 756 aa15.31■□□□□ 0.04
BRCA1-218ENST00000489037 N4BP1O75113 896 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms