RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 HOXA13P31271 388 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 GYS2P54840 703 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 NLRP5P59047 1200 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 HMGN5P82970 282 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 GHRHRQ02643 423 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 ACVR2BQ13705 512 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 TRIM29Q14134 588 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 MBLAC2Q68D91 279 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 ARMCX2Q7L311 632 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 BRAPQ7Z569 592 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 CCDC83Q8IWF9 413 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 FAM184AQ8NB25 1140 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 TBC1D5Q92609 795 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 NINJ1Q92982 152 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 IWS1Q96ST2 819 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 LLPHQ9BRT6 129 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 RIC8AQ9NPQ8 531 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 SH3GLB2Q9NR46 395 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 CLDND1Q9NY35 253 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 ORC3Q9UBD5 711 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 ACSL6Q9UKU0 697 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 ZHX1Q9UKY1 873 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 KIF3AQ9Y496 699 aa9.09□□□□□ -0.95
TRAPPC12-221ENST00000489032 LRRC37A2A6NM11 1700 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 ESYT2A0FGR8 921 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 ARNTLO00327 626 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 LARGE1O95461 756 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 CRTAMO95727 393 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 FOSP01100 380 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 MYCLP12524 364 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 AKR1A1P14550 325 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 CCND2P30279 289 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 FLT3P36888 993 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■□□□□ 11
TRAPPC12-221ENST00000489032 LRRC41Q15345 812 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 STXBP2Q15833 593 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PKN1Q16512 942 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 BICRALQ6AI39 1079 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 GALNT17Q6IS24 598 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 ZC3H7AQ8IWR0 971 aaKnown RBP9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 TAAR1Q96RJ0 339 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 UIMC1Q96RL1 719 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PLCD4Q9BRC7 762 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 KCNH6Q9H252 994 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 VTA1Q9NP79 307 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 CRTAC1Q9NQ79 661 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PXMP2Q9NR77 195 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 VPS54Q9P1Q0 977 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 FAM184BQ9ULE4 1060 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.966e-6■■■■■ 55.1
TRAPPC12-221ENST00000489032 COG5Q9UP83 839 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PCDHA9Q9Y5H5 950 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 PCDHA8Q9Y5H6 950 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 SMCHD1A6NHR9 2005 aa9.08□□□□□ -0.96
TRAPPC12-221ENST00000489032 CACNA1AO00555 2505 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 CHD7Q9P2D1 2997 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 C22orf46C9J442 243 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 OPA1O60313 960 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 STAM2O75886 525 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 TIMP1P01033 207 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 RARBP10826 455 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 PNLIPP16233 465 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 TACR1P25103 407 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 MVKQ03426 396 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 PAK1Q13153 545 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 TMEM240Q5SV17 173 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 PRAMEF19Q5SWL8 479 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 RNF187Q5TA31 235 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 MFSD5Q6N075 450 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 XRRA1Q6P2D8 792 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 USP17L6PQ6QN14 398 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 HSCBQ8IWL3 235 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 NSUN7Q8NE18 718 aaKnown RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 GSTCDQ8NEC7 633 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 MORC4Q8TE76 937 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 TMX3Q96JJ7 454 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 TOX2Q96NM4 488 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 ANP32EQ9BTT0 268 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 ZMYND12Q9H0C1 365 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 SPC25Q9HBM1 224 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 MAGEC2Q9UBF1 373 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 PCDHA6Q9UN73 950 aa9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC12-221ENST00000489032 GBF1Q92538 1859 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 FAM47E-STBD1D6RA91 191 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 H7BY64 318 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 MEIS2O14770 477 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 GSTA4O15217 222 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 CTDNEP1O95476 244 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 SNAI1O95863 264 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 SOD2P04179 222 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 EDNRBP24530 442 aa9.06□□□□□ -0.96
TRAPPC12-221ENST00000489032 IRAK1P51617 712 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms