RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TMEM150BA6NC51 233 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 NDC80O14777 642 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 ALOX15BO15296 676 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 LMNAP02545 664 aaKnown RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 CD58P19256 250 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 EPHB2P29323 1055 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 PAPOLAP51003 745 aaKnown RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 NFX1Q12986 1120 aaKnown RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 MAMLD1Q13495 774 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 C2CD6Q53TS8 623 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 SLC39A4Q6P5W5 647 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 ZNF449Q6P9G9 518 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 CCDC125Q86Z20 511 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 LMNTD2Q8IXW0 634 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 POMGNT1Q8WZA1 660 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 ANKEF1Q9NU02 776 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 TBC1D22BQ9NU19 505 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 ZMYND8Q9ULU4 1186 aaPredicted RBP20.58■□□□□ 0.89
HMG20B-213ENST00000488973 SCINQ9Y6U3 715 aa20.58■□□□□ 0.89
HMG20B-213ENST00000488973 UGCGQ16739 394 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 XKR9Q5GH70 373 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 PLEKHA7Q6IQ23 1121 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 C15orf39Q6ZRI6 1047 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 OTOAQ7RTW8 1153 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 GPD1LQ8N335 351 aa20.58■□□□□ 0.88
HMG20B-213ENST00000488973 LINGO3P0C6S8 592 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 PSMC5P62195 406 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 TAF1BQ53T94 588 aaPredicted RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ANO7Q6IWH7 933 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 RCOR2Q8IZ40 523 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ALLCQ8N6M5 410 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 B4GALNT2Q8NHY0 566 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 IL31RAQ8NI17 732 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ZNF75CPQ92670 426 aaPredicted RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 RBM41Q96IZ5 413 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 PLEKHG4BQ96PX9 1271 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 C11orf70Q9BRQ4 267 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 NTPCRQ9BSD7 190 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 VPS37BQ9H9H4 285 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 KMT5AQ9NQR1 393 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 COL20A1Q9P218 1284 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 PSMC3IPQ9P2W1 217 aaPredicted RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ZFP69BQ9UJL9 534 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 BLOC1S6Q9UL45 172 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 DNPEPQ9ULA0 475 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ZNF148Q9UQR1 794 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 DRG1Q9Y295 367 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ZWINTO95229 277 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 CBX6O95503 412 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ARSEP51690 589 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 MRPS35P82673 323 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 RNASELQ05823 741 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 FASTKD3Q14CZ7 662 aaKnown RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 FYB2Q5VWT5 728 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 TRIM68Q6AZZ1 485 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 CC2D2BQ6DHV5 1058 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 NLRP9Q7RTR0 991 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 SDCCAG8Q86SQ7 713 aaPredicted RBP20.57■□□□□ 0.88
HMG20B-213ENST00000488973 GLIS1Q8NBF1 620 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 SPIRE2Q8WWL2 714 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 KIFC3Q9BVG8 833 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 DCLRE1BQ9H816 532 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 USTQ9Y2C2 406 aa20.57■□□□□ 0.88
HMG20B-213ENST00000488973 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ZBED4O75132 1171 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 TJP3O95049 919 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ACADSP16219 412 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 MARK3P27448 753 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 DSG3P32926 999 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 NOMO3P69849 1222 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 PPP1R2P3Q6NXS1 205 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 CENPUQ71F23 418 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 PHF13Q86YI8 300 aaPredicted RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 APLFQ8IW19 511 aaPredicted RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ZFAND2BQ8WV99 257 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 DENND2DQ9H6A0 471 aaPredicted RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 FETUBQ9UGM5 382 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ZNF232Q9UNY5 417 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ZSCAN9O15535 394 aaPredicted RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 GARTP22102 1010 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 PCK1P35558 622 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 PTDSS1P48651 473 aaKnown RBP20.56■□□□□ 0.88
HMG20B-213ENST00000488973 GPS1Q13098 491 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 MTMR1Q13613 665 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 TSNAXIP1Q2TAA8 658 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 WDR44Q5JSH3 913 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 LVRNQ6Q4G3 990 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 FAM81AQ8TBF8 368 aa20.56■□□□□ 0.88
HMG20B-213ENST00000488973 ECE2O60344 883 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 GJC1P36383 396 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 EFHC2Q5JST6 749 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 RNASEH2BQ5TBB1 312 aaKnown RBP20.55■□□□□ 0.88
HMG20B-213ENST00000488973 PLA2G4FQ68DD2 849 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 ZBED8Q8IZ13 594 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 SLITRK1Q96PX8 696 aa20.55■□□□□ 0.88
HMG20B-213ENST00000488973 C17orf75Q9HAS0 396 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms