RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 KCNB1Q14721 858 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 NFE2Q16621 373 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 ARHGAP15Q53QZ3 475 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 ADGRF2Q8IZF7 708 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 TOP6BLQ8N6T0 577 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 SYAP1Q96A49 352 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 LRFN3Q9BTN0 628 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 KCNK12Q9HB15 430 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 ABI2Q9NYB9 513 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 PCDHB5Q9Y5E4 795 aa12.04□□□□□ -0.48
ARHGEF39-204ENST00000488918 BRWD1Q9NSI6 2320 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 SPTLC1O15269 473 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 STX10O60499 249 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 LAMP2P13473 410 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 NR2F2P24468 414 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 PNOCQ13519 176 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 MAPRE1Q15691 268 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 DPH6Q7L8W6 267 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 TRAPPC11Q7Z392 1133 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 SPATA2LQ8IUW3 424 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 SPATA18Q8TC71 538 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 SPPL2BQ8TCT7 592 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 ING5Q8WYH8 240 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 DDX43Q9NXZ2 648 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 GDE1Q9NZC3 331 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 YIPF1Q9Y548 306 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 ASB3Q9Y575 518 aa12.03□□□□□ -0.48
ARHGEF39-204ENST00000488918 A0A0C4DFX4 3053 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 CETN3O15182 167 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 SEC24AO95486 1093 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 EPB41P11171 864 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 COL9A1P20849 921 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 ATICP31939 592 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 HOXD13P35453 343 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 PSMC2P35998 433 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 PPP1R2P41236 205 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 RPL10AP62906 217 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 NTHL1P78549 312 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 ADAM9Q13443 819 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 WDR72Q3MJ13 1102 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 TMEM130Q8N3G9 435 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 ATAD1Q8NBU5 361 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 OR6B3Q8NGW1 331 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 FGF13Q92913 245 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 MYADMQ96S97 322 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 ACBD6Q9BR61 282 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 GPR88Q9GZN0 384 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 ZCWPW1Q9H0M4 648 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 HCFC1R1Q9NWW0 138 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 GDAP2Q9NXN4 497 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 HSFX1Q9UBD0 423 aa12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
ARHGEF39-204ENST00000488918 XIRP2A4UGR9 3374 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 MTMR11A4FU01 709 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 DPYSL4O14531 572 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 PSMA7O14818 248 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 ANXA13P27216 316 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 PIK3CAP42336 1068 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 ZNF699Q32M78 642 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 ZNF667Q5HYK9 610 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 YAF2Q8IY57 180 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 FAM186BQ8IYM0 893 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 OR5B17Q8NGF7 314 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
ARHGEF39-204ENST00000488918 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 IKBKBO14920 756 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
ARHGEF39-204ENST00000488918 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
ARHGEF39-204ENST00000488918 VAMP7P51809 220 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 WNT7BP56706 349 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 UBE2HP62256 183 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 PFKPQ01813 784 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 CYP27A1Q02318 531 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 NCOA4Q13772 614 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 SGSM1Q2NKQ1 1148 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 TCERG1LQ5VWI1 586 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 HFE2Q6ZVN8 426 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 FLCNQ8NFG4 579 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
ARHGEF39-204ENST00000488918 ITFG1Q8TB96 612 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms