RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 MAGOHBQ96A72 148 aaKnown RBP14.17□□□□□ -0.14
CHD1L-208ENST00000488864 LRRC45Q96CN5 670 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 EIF2AQ9BY44 585 aaKnown RBP14.17□□□□□ -0.14
CHD1L-208ENST00000488864 GANQ9H2C0 597 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 RBAKQ9NYW8 714 aaPredicted RBP14.17□□□□□ -0.14
CHD1L-208ENST00000488864 AIPL1Q9NZN9 384 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 ST3GAL5Q9UNP4 418 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 HES2Q9Y543 173 aa14.17□□□□□ -0.14
CHD1L-208ENST00000488864 C5orf60A6NFR6 353 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 OGTO15294 1046 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 GCLMP48507 274 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 PTK2Q05397 1052 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CYP24A1Q07973 514 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 BIRC3Q13489 604 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 TRIM60Q495X7 471 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 INTS8Q75QN2 995 aaKnown RBP14.16□□□□□ -0.14
CHD1L-208ENST00000488864 ZNF571Q7Z3V5 609 aaPredicted RBP14.16□□□□□ -0.14
CHD1L-208ENST00000488864 EIF1ADQ8N9N8 165 aaKnown RBP14.16□□□□□ -0.14
CHD1L-208ENST00000488864 MDM1Q8TC05 714 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 TMEM174Q8WUU8 243 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHD1L-208ENST00000488864 N4BP2L2Q92802 583 aaPredicted RBP14.16□□□□□ -0.14
CHD1L-208ENST00000488864 AMACRQ9UHK6 382 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 NPTXRO95502 500 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CD52P31358 61 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CBWD6Q4V339 395 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CBWD3Q5JTY5 395 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CBWD5Q5RIA9 395 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 AGBL2Q5U5Z8 902 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 CACNA2D3Q8IZS8 1091 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 LRRC57Q8N9N7 239 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 C3orf20Q8ND61 904 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 ACTRT1Q8TDG2 376 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 TATDN2Q93075 761 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 SGSM3Q96HU1 749 aa14.16□□□□□ -0.14
CHD1L-208ENST00000488864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■■■■■ 81.5
CHD1L-208ENST00000488864 CES2O00748 559 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 AFPP02771 609 aaKnown RBP14.15□□□□□ -0.14
CHD1L-208ENST00000488864 DRD4P21917 467 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 C1orf220Q5T0J3 134 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 NOTUMQ6P988 496 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 PARD3BQ8TEW8 1205 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 PBKQ96KB5 322 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 ADPGKQ9BRR6 497 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 ATP11BQ9Y2G3 1177 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 UMODL1Q5DID0 1318 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 LRRN2O75325 713 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 LDHAP00338 332 aaKnown RBP14.15□□□□□ -0.14
CHD1L-208ENST00000488864 PAEPP09466 180 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 CXCL8P10145 99 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 TLE2Q04725 743 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 SF3A3Q12874 501 aaKnown RBP eCLIP14.15□□□□□ -0.141e-23■■■■□ 23.4
CHD1L-208ENST00000488864 LPIN1Q14693 890 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 MBTPS1Q14703 1052 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 E2F5Q15329 346 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 LACTB2Q53H82 288 aaPredicted RBP14.15□□□□□ -0.14
CHD1L-208ENST00000488864 TWF2Q6IBS0 349 aaKnown RBP14.15□□□□□ -0.14
CHD1L-208ENST00000488864 IRF2BP2Q7Z5L9 587 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 CCT6BQ92526 530 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 MFSD14AQ96MC6 490 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 APOL6Q9BWW8 343 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 PADI3Q9ULW8 664 aa14.15□□□□□ -0.14
CHD1L-208ENST00000488864 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.15□□□□□ -0.14
CHD1L-208ENST00000488864 PGRMC1O00264 195 aaKnown RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 KRIT1O00522 736 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TTI1O43156 1089 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 CD4P01730 458 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 STAG3L1P0CL83 205 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 COL6A1P12109 1028 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 ELMO3Q96BJ8 720 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 FNBP1Q96RU3 617 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.14□□□□□ -0.151e-9■□□□□ 10.4
CHD1L-208ENST00000488864 TRIM6Q9C030 488 aaPredicted RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 DPH5Q9H2P9 285 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 NXF3Q9H4D5 531 aaKnown RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 KIAA1586Q9HCI6 787 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 CPSF3Q9UKF6 684 aaKnown RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 PTPRJQ12913 1337 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 BTNL10A8MVZ5 291 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TMCO5BA8MYB1 307 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TNNI1P19237 187 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 EN2P19622 333 aaPredicted RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 SLC9A1P19634 815 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 FMO5P49326 533 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 KRT71Q3SY84 523 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 DPY19L2P1Q6NXN4 242 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 SLC27A1Q6PCB7 646 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TRAF7Q6Q0C0 670 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 EP400NLQ6ZTU2 488 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 CPLX4Q7Z7G2 160 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TMEM130Q8N3G9 435 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 TACO1Q9BSH4 297 aaKnown RBP14.14□□□□□ -0.15
CHD1L-208ENST00000488864 PPP1R12CQ9BZL4 782 aa14.14□□□□□ -0.15
CHD1L-208ENST00000488864 F8VZ95 297 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms