RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 BECN2A8MW95 431 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 TPM2P07951 284 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 WARSP23381 471 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 OR1D2P34982 312 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 CLCN4P51793 760 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 NOP14P78316 857 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MYL7Q01449 175 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 IQCB1Q15051 598 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 VWA3BQ502W6 1294 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 LRSAM1Q6UWE0 723 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 DHX40Q8IX18 779 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 ADGRF2Q8IZF7 708 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 SLC22A17Q8WUG5 538 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 CASP10Q92851 521 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 NDST4Q9H3R1 872 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 COG5Q9UP83 839 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 TIMM13Q9Y5L4 95 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 CDY1Q9Y6F8 540 aa18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MTCL1Q9Y4B5 1905 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP1-214ENST00000488723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 PER2O15055 1255 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 ABLIM3O94929 683 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 GLUD1P00367 558 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 PCSK1P29120 753 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 ZNF445P59923 1031 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 GPR17Q13304 367 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 RBM23Q86U06 439 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 AOPEPQ8N6M6 819 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 EHBP1Q8NDI1 1231 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 SEMA4DQ92854 862 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 FAM81BQ96LP2 452 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 HSFX1Q9UBD0 423 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 NXF1Q9UBU9 619 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 LIMA1Q9UHB6 759 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 HCFC2Q9Y5Z7 792 aa18.28■□□□□ 0.52
CDK5RAP1-214ENST00000488723 HOXB8P17481 243 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 CDK11BP21127 795 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 GNL1P36915 607 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 UVSSAQ2YD98 709 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MIIPQ5JXC2 388 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 RSPO2Q6UXX9 243 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 GBP6Q6ZN66 633 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 UNC93AQ86WB7 457 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 DCP1BQ8IZD4 617 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 MICALL1Q8N3F8 863 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 LMO3Q8TAP4 145 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 FAM200AQ8TCP9 573 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 C2orf15Q8WU43 125 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 KBTBD7Q8WVZ9 684 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 DNAI2Q9GZS0 605 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 ZCWPW1Q9H0M4 648 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 HSD3B7Q9H2F3 369 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 DZANK1Q9NVP4 752 aa18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 DDX43Q9NXZ2 648 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP1-214ENST00000488723 COL6A3P12111 3177 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TGM5O43548 720 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 CSPG5O95196 566 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 PAPLNO95428 1278 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 ATF2P15336 505 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 RPL17P18621 184 aaKnown RBP18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TBXAS1P24557 533 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 ASPAP45381 313 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TPM4P67936 248 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TSPY1Q01534 308 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 ROR1Q01973 937 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 KRT31Q15323 416 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 MAPRE1Q15691 268 aaKnown RBP18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 JAKMIP2Q96AA8 810 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 RTP3Q9BQQ7 232 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 PI4K2AQ9BTU6 479 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 RHOBTB2Q9BYZ6 727 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 SNX25Q9H3E2 840 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 IGFLR1Q9H665 355 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 APOBEC3GQ9HC16 384 aaKnown RBP18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 CBX8Q9HC52 389 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 CDH9Q9ULB4 789 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 PRUNE2Q8WUY3 3088 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TSC2P49815 1807 aa18.26■□□□□ 0.51
CDK5RAP1-214ENST00000488723 ADAM12O43184 909 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 YWHAEP62258 255 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 INCA1Q0VD86 236 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 CCDC85BQ15834 202 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 NFE2Q16621 373 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 EXOC3L4Q17RC7 722 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 CYP26C1Q6V0L0 522 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 PALB2Q86YC2 1186 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TCEAL8Q8IYN2 117 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 HLA-CQ95604 372 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 NT5C1BQ96P26 610 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TSPY26PQ9H489 355 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 FBXW11Q9UKB1 542 aa18.25■□□□□ 0.51
CDK5RAP1-214ENST00000488723 WDR27A2RRH5 827 aa18.24■□□□□ 0.51
CDK5RAP1-214ENST00000488723 TRIM21P19474 475 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP1-214ENST00000488723 HOXA9P31269 272 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms