RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 FAM177A1Q8N128 213 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 CEP120Q8N960 986 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 BSNDQ8WZ55 320 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 PSMG2Q969U7 264 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 C18orf25Q96B23 403 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 CHFRQ96EP1 664 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 ZMAT2Q96NC0 199 aaKnown RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 ACAP3Q96P50 834 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 FAM83CQ9BQN1 747 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 TCHPQ9BT92 498 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 KIFC3Q9BVG8 833 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 OXCT2Q9BYC2 517 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 CCDC113Q9H0I3 377 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 TTC12Q9H892 705 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 HPS4Q9NQG7 708 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 SOAT2O75908 522 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 ENGP17813 658 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 WEE1P30291 646 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 CDC25CP30307 473 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 AVPR1AP37288 418 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 EFNA5P52803 228 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 GPR17Q13304 367 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 VEPH1Q14D04 833 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 ZNF568Q3ZCX4 644 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 XKR4Q5GH76 650 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 CENPPQ6IPU0 288 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 DSTYKQ6XUX3 929 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 LPCAT2Q7L5N7 544 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 FBXL16Q8N461 479 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 TTC16Q8NEE8 873 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 BEST2Q8NFU1 509 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 LRIG1Q96JA1 1093 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
COL17A1-207ENST00000488320 GTPBP2Q9BX10 602 aaKnown RBP10.11□□□□□ -0.79
COL17A1-207ENST00000488320 SLC46A2Q9BY10 475 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 CRISPLD1Q9H336 500 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 CCDC86Q9H6F5 360 aaKnown RBP10.11□□□□□ -0.79
COL17A1-207ENST00000488320 POLD4Q9HCU8 107 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 EVLQ9UI08 416 aaPredicted RBP10.11□□□□□ -0.79
COL17A1-207ENST00000488320 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 CITO14578 2027 aa10.11□□□□□ -0.79
COL17A1-207ENST00000488320 FAM221BA6H8Z2 402 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 OTOL1A6NHN0 477 aaPredicted RBP10.1□□□□□ -0.79
COL17A1-207ENST00000488320 OR6C75A6NL08 312 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 VNN2O95498 520 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 HARSP12081 509 aaKnown RBP10.1□□□□□ -0.79
COL17A1-207ENST00000488320 ARSAP15289 507 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 KCNE1P15382 129 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 BCKDHBP21953 392 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 PSMA5P28066 241 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 HSPA4P34932 840 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 GJA4P35212 333 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 STK3Q13188 491 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 ZNF423Q2M1K9 1284 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 ANO7Q6IWH7 933 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 CMTM8Q8IZV2 173 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 ATAD1Q8NBU5 361 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 CCDC26Q8TAB7 109 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 CD101Q93033 1021 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 SEPT5Q99719 369 aaPredicted RBP10.1□□□□□ -0.79
COL17A1-207ENST00000488320 AGXT2Q9BYV1 514 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 CDT1Q9H211 546 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 PCDHB9Q9Y5E1 797 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 SNX14Q9Y5W7 946 aa10.1□□□□□ -0.79
COL17A1-207ENST00000488320 ADAMTS9Q9P2N4 1935 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 MTMR11A4FU01 709 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 OPHN1O60890 802 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 ALDH1A2O94788 518 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 OAZ2O95190 189 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CAPNS1P04632 268 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CFIP05156 583 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CYP11B2P19099 503 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 TUFMP49411 452 aaKnown RBP10.09□□□□□ -0.79
COL17A1-207ENST00000488320 SEC13P55735 322 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 SEMA3BQ13214 749 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 MGAT5BQ3V5L5 792 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 C2orf27AQ580R0 203 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 SYT12Q8IV01 421 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 TMEFF1Q8IYR6 380 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 CPA6Q8N4T0 437 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 GLIS3Q8NEA6 775 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 GIPC2Q8TF65 315 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 BBC3Q96PG8 261 aaPredicted RBP10.09□□□□□ -0.79
COL17A1-207ENST00000488320 ACO2Q99798 780 aaKnown RBP10.09□□□□□ -0.79
COL17A1-207ENST00000488320 LPIN3Q9BQK8 851 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
COL17A1-207ENST00000488320 TUFT1Q9NNX1 390 aa10.09□□□□□ -0.79
COL17A1-207ENST00000488320 TDP1Q9NUW8 608 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms