RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 HLA-CQ95604 372 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 BPIFA3Q9BQP9 254 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 PI4K2AQ9BTU6 479 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 THEGQ9P2T0 379 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 FBXL5Q9UKA1 691 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 L1RE1Q9UN81 338 aa16.87■□□□□ 0.29
C9orf3-219ENST00000488186 A0A0C4DFX4 3053 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 SCN1AP35498 2009 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 P4HA2O15460 535 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 ASS1P00966 412 aaKnown RBP16.86■□□□□ 0.29
C9orf3-219ENST00000488186 CPB1P15086 417 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 ELF1P32519 619 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.29
C9orf3-219ENST00000488186 TSPY1Q01534 308 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 MRPL58Q14197 206 aaKnown RBP16.86■□□□□ 0.29
C9orf3-219ENST00000488186 MAN2A1Q16706 1144 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 SCARA5Q6ZMJ2 495 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 OR6B3Q8NGW1 331 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 CASP10Q92851 521 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 FUCA2Q9BTY2 467 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 XYLT2Q9H1B5 865 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 VRTNQ9H8Y1 702 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 POLIQ9UNA4 740 aa16.86■□□□□ 0.29
C9orf3-219ENST00000488186 FAM163BP0C2L3 166 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 TRIM21P19474 475 aaKnown RBP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 NOP14P78316 857 aaKnown RBP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 ADAM15Q13444 863 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 KCNC3Q14003 757 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 SPOPLQ6IQ16 392 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 DCP1BQ8IZD4 617 aaKnown RBP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 SPATA18Q8TC71 538 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 SEMA4DQ92854 862 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 ELMO3Q96BJ8 720 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 DDX43Q9NXZ2 648 aaKnown RBP16.85■□□□□ 0.29
C9orf3-219ENST00000488186 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
C9orf3-219ENST00000488186 GOLGA6L19H0YKK7 550 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 PMM2O15305 246 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 TGM5O43548 720 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 SPATA31D3P0C874 917 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 PCSK1P29120 753 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 CLCN4P51793 760 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 RAB33AQ14088 237 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 SLC8B1Q6J4K2 584 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 SPATA31D4Q6ZUB0 917 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 EHBP1Q8NDI1 1231 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 NDST4Q9H3R1 872 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 UBE2ZQ9H832 354 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-219ENST00000488186 COQ4Q9Y3A0 265 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 HCFC2Q9Y5Z7 792 aa16.84■□□□□ 0.29
C9orf3-219ENST00000488186 A8MXQ7 604 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 LINC01565O15544 149 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 ADAM12O43184 909 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 TACC1O75410 805 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 PDGFRBP09619 1106 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 EPCAMP16422 314 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 WARSP23381 471 aaKnown RBP16.83■□□□□ 0.28
C9orf3-219ENST00000488186 CDH8P55286 799 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 MRPS5P82675 430 aaKnown RBP16.83■□□□□ 0.28
C9orf3-219ENST00000488186 LRMPQ12912 555 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 PUS10Q3MIT2 529 aaKnown RBP16.83■□□□□ 0.28
C9orf3-219ENST00000488186 LIN9Q5TKA1 542 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 CDKAL1Q5VV42 579 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 TPGS2Q68CL5 300 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-219ENST00000488186 GBP6Q6ZN66 633 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 KREMEN2Q8NCW0 462 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 ZNF461Q8TAF7 563 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 SLC22A17Q8WUG5 538 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 NT5C1BQ96P26 610 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 ACBD6Q9BR61 282 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 VPS16Q9H269 839 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 SMYD3Q9H7B4 428 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 CYP3A43Q9HB55 503 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 CBX8Q9HC52 389 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 TAB2Q9NYJ8 693 aa16.83■□□□□ 0.28
C9orf3-219ENST00000488186 PRRG1O14668 218 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 WEE2P0C1S8 567 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 OR4Q2P0C623 313 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
C9orf3-219ENST00000488186 RAP1GAPP47736 663 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 ROR1Q01973 937 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 SLC39A12Q504Y0 691 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 FKBP15Q5T1M5 1219 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 DHX40Q8IX18 779 aaKnown RBP16.82■□□□□ 0.28
C9orf3-219ENST00000488186 TATDN2Q93075 761 aa16.82■□□□□ 0.28
C9orf3-219ENST00000488186 FAXDC2Q96IV6 333 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms