RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 NCANO14594 1321 aa20.86■□□□□ 0.93
CD55-209ENST00000488171 COL4A2P08572 1712 aa20.86■□□□□ 0.93
CD55-209ENST00000488171 A0A1W2PRU2 124 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 EXTL3O43909 919 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ZSCAN22P10073 491 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 CD72P21854 359 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 CDR1P51861 262 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 TFAMQ00059 246 aaKnown RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 FOXD4L6Q3SYB3 417 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 SV2CQ496J9 727 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 SLC39A12Q504Y0 691 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 FOXD4L3Q6VB84 417 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 METTL23Q86XA0 190 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 CXorf38Q8TB03 319 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ZSCAN18Q8TBC5 510 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 PSMG2Q969U7 264 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 FAM84AQ96KN4 292 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ZNF560Q96MR9 790 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 LRRC27Q9C0I9 530 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 TRPV4Q9HBA0 871 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ZNF334Q9HCZ1 680 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 LTB4R2Q9NPC1 389 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 HEBP1Q9NRV9 189 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ASB3Q9Y575 518 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 VPS13AQ96RL7 3174 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 SHISA7A6NL88 538 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 F13A1P00488 732 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 ITGB3P05106 788 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 POLR2BP30876 1174 aaKnown RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 HOXD13P35453 343 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 PNPLA4P41247 253 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 VIPR2P41587 438 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 UBXN2BQ14CS0 331 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 CNNM4Q6P4Q7 775 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 TPRG1Q6ZUI0 275 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 DNAJB7Q7Z6W7 309 aaPredicted RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 LRRTM3Q86VH5 581 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 C1orf210Q8IVY1 113 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 DNASE1L2Q92874 299 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 TRMT61BQ9BVS5 477 aaKnown RBP20.85■□□□□ 0.93
CD55-209ENST00000488171 OSBPL6Q9BZF3 934 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 PDE11AQ9HCR9 933 aa20.85■□□□□ 0.93
CD55-209ENST00000488171 FAM170BA6NMN3 283 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 PDIA4P13667 645 aaKnown RBP20.84■□□□□ 0.93
CD55-209ENST00000488171 PSMC3P17980 439 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 ATF6P18850 670 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 PKP1Q13835 747 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 STXBP5Q5T5C0 1151 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 GAREM2Q75VX8 874 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 THEM5Q8N1Q8 247 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 GPD1LQ8N335 351 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 IQUBQ8NA54 791 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 NKD2Q969F2 451 aaPredicted RBP20.84■□□□□ 0.93
CD55-209ENST00000488171 GPR88Q9GZN0 384 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 BRD9Q9H8M2 597 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
CD55-209ENST00000488171 TULP1O00294 542 aaPredicted RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 TARSP26639 723 aaKnown RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 TUFMP49411 452 aaKnown RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 ASIC1P78348 528 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 AMPD3Q01432 767 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 STXBP4Q6ZWJ1 553 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 NOC3LQ8WTT2 800 aaKnown RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 C2orf15Q8WU43 125 aaKnown RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 CACTINQ8WUQ7 758 aaKnown RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 RSPRY1Q96DX4 576 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 SEPT5Q99719 369 aaPredicted RBP20.83■□□□□ 0.92
CD55-209ENST00000488171 LPIN3Q9BQK8 851 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 MKNK1Q9BUB5 465 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 SLITRK6Q9H5Y7 841 aa20.83■□□□□ 0.92
CD55-209ENST00000488171 PATJQ8NI35 1801 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 KIAA0391O15091 583 aaKnown RBP20.82■□□□□ 0.92
CD55-209ENST00000488171 HSP90AA1P07900 732 aaKnown RBP20.82■□□□□ 0.92
CD55-209ENST00000488171 GDI1P31150 447 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 MGAT5BQ3V5L5 792 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 EPM2AIP1Q7L775 607 aaPredicted RBP20.82■□□□□ 0.92
CD55-209ENST00000488171 ITIH5Q86UX2 942 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 MFSD6LQ8IWD5 586 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 MAML2Q8IZL2 1156 aaPredicted RBP20.82■□□□□ 0.92
CD55-209ENST00000488171 PDCL2Q8N4E4 241 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 CSGALNACT2Q8N6G5 542 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 LRRC52Q8N7C0 313 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 SPPL2BQ8TCT7 592 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 KCNG4Q8TDN1 519 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 DEPDC1BQ8WUY9 529 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 C7orf25Q9BPX7 421 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 BCO2Q9BYV7 579 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 MTMR12Q9C0I1 747 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 TRPV5Q9NQA5 729 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 SIX4Q9UIU6 781 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 ITGA11Q9UKX5 1188 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 PCDHA7Q9UN72 937 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 L1RE1Q9UN81 338 aa20.82■□□□□ 0.92
CD55-209ENST00000488171 DMDP11532 3685 aa20.81■□□□□ 0.92
CD55-209ENST00000488171 TICRRQ7Z2Z1 1910 aa20.81■□□□□ 0.92
CD55-209ENST00000488171 ZFHX2Q9C0A1 2572 aaPredicted RBP20.81■□□□□ 0.92
CD55-209ENST00000488171 HEPACAM2A8MVW5 462 aa20.81■□□□□ 0.92
CD55-209ENST00000488171 EIF3DO15371 548 aaKnown RBP eCLIP20.81■□□□□ 0.92
CD55-209ENST00000488171 POLR2DO15514 142 aaKnown RBP20.81■□□□□ 0.92
CD55-209ENST00000488171 SP9P0CG40 484 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms