RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.45
NIPAL3-207ENST00000488155 COL4A2P08572 1712 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 SPTBN4Q9H254 2564 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 FAM170BA6NMN3 283 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 CUTAO60888 179 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 PPP6R2O75170 966 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 IL18RAPO95256 599 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ITGB3P05106 788 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 KRT19P08727 400 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ZSCAN22P10073 491 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 GARTP22102 1010 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 FCARP24071 287 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 POLR2BP30876 1174 aaKnown RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ASIC1P78348 528 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 PFKPQ01813 784 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 PKP1Q13835 747 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 E2F4Q16254 413 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 MGAT5BQ3V5L5 792 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 STXBP5Q5T5C0 1151 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 VITQ6UXI7 678 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 DNAJB7Q7Z6W7 309 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 LRRTM3Q86VH5 581 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ELSPBP1Q96BH3 223 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 BORCS6Q96GS4 357 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ASB16Q96NS5 453 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 LRRC3Q9BY71 257 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 OXCT2Q9BYC2 517 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 BRD9Q9H8M2 597 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 PDE11AQ9HCR9 933 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 ZNF334Q9HCZ1 680 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 RBAKQ9NYW8 714 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 MORC2Q9Y6X9 1032 aaPredicted RBP12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 R4GN57 208 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 CFAP54Q96N23 3096 aa12.2□□□□□ -0.46
NIPAL3-207ENST00000488155 SPAG17Q6Q759 2223 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 NCANO14594 1321 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 KPNA7A9QM74 516 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 POLR2DO15514 142 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 YEATS4O95619 227 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 LDHAP00338 332 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 F13A1P00488 732 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 CYP11A1P05108 521 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 GDI1P31150 447 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 NBL1P41271 181 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 EPHA5P54756 1037 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 PRKCQQ04759 706 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 BFSP1Q12934 665 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 PLD1Q13393 1074 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 SV2CQ496J9 727 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 CSGALNACT2Q8N6G5 542 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 C1orf127Q8N9H9 656 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 NKD2Q969F2 451 aaPredicted RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 ZCWPW1Q9H0M4 648 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 BLZF1Q9H2G9 400 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 TMEM206Q9H813 350 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 LTB4R2Q9NPC1 389 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 ABI2Q9NYB9 513 aaPredicted RBP12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 DLGAP2Q9P1A6 1054 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 DSEQ9UL01 958 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
NIPAL3-207ENST00000488155 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 PRR23AA6NEV1 266 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 HEPACAM2A8MVW5 462 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 HCRTO43612 131 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 EXTL3O43909 919 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 MICAL2O94851 1124 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 PSMC3P17980 439 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 ACAT1P24752 427 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 TARSP26639 723 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 GABRR2P28476 465 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 AFMP43652 599 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 ME1P48163 572 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 CYP4F8P98187 520 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 ALCAMQ13740 583 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 GAREM2Q75VX8 874 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 NT5DC4Q86YG4 428 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 C1orf210Q8IVY1 113 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 NELFCDQ8IXH7 590 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 GPD1LQ8N335 351 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 STKLD1Q8NE28 680 aa12.18□□□□□ -0.46
NIPAL3-207ENST00000488155 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms