RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TNFSF9P41273 254 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 VAMP7P51809 220 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 ADCY2Q08462 1091 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 SERINC5Q86VE9 423 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 SESTD1Q86VW0 696 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
COPS7B-221ENST00000488111 THNSL1Q8IYQ7 743 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 UBLCP1Q8WVY7 318 aaPredicted RBP14.59□□□□□ -0.07
COPS7B-221ENST00000488111 CALR3Q96L12 384 aaKnown RBP14.59□□□□□ -0.07
COPS7B-221ENST00000488111 FBXL18Q96ME1 805 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 ZNF570Q96NI8 536 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 NOP53Q9NZM5 478 aaKnown RBP14.59□□□□□ -0.07
COPS7B-221ENST00000488111 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
COPS7B-221ENST00000488111 NOD1Q9Y239 953 aa14.59□□□□□ -0.07
COPS7B-221ENST00000488111 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 LIN7AO14910 233 aaPredicted RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 EXTL3O43909 919 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TSPAN1O60635 241 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 SERPING1P05155 500 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 DARSP14868 501 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 FLT3P36888 993 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 WNT7BP56706 349 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 KCNMA1Q12791 1236 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 SNX17Q15036 470 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 FAM187BQ17R55 369 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 ZNF568Q3ZCX4 644 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TDRD12Q587J7 1177 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 INTS8Q75QN2 995 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TMC3Q7Z5M5 1100 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 NME8Q8N427 588 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 ACTRT1Q8TDG2 376 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TRPV6Q9H1D0 765 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 KIF9Q9HAQ2 790 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 F8VZ95 297 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 DLATP10515 647 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 THPOP40225 353 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CDC42EP1Q00587 391 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 KRT71Q3SY84 523 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CBWD6Q4V339 395 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CBWD3Q5JTY5 395 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CBWD5Q5RIA9 395 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 C1orf220Q5T0J3 134 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 MPZL3Q6UWV2 235 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 AGAP11Q8TF27 550 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TAF4BQ92750 862 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 PBKQ96KB5 322 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CELF4Q9BZC1 486 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TOPORSQ9NS56 1045 aaPredicted RBP14.58□□□□□ -0.08
COPS7B-221ENST00000488111 TNFSF13BQ9Y275 285 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 CDY2AQ9Y6F7 541 aa14.58□□□□□ -0.08
COPS7B-221ENST00000488111 SART1O43290 800 aaKnown RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 PROZP22891 400 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 GCLMP48507 274 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 MCL1Q07820 350 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 PPP3CAQ08209 521 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 LMBRD2Q68DH5 695 aaPredicted RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CAPRIN2Q6IMN6 1127 aaKnown RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CACNA2D4Q7Z3S7 1137 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 SEC14L1Q92503 715 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CDT1Q9H211 546 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 PDZD7Q9H5P4 517 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CORO1CQ9ULV4 474 aaPredicted RBP14.57□□□□□ -0.08
COPS7B-221ENST00000488111 PHF24Q9UPV7 400 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 L3MBTL1Q9Y468 752 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 CNTNAP2Q9UHC6 1331 aa14.57□□□□□ -0.08
COPS7B-221ENST00000488111 BTNL10A8MVZ5 291 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 B4GALT4O60513 344 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 CHRNA1P02708 482 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 CLTAP09496 248 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 CRYBB1P53674 252 aaPredicted RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 EIF3BP55884 814 aaKnown RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 RSPH3Q86UC2 560 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 TMEM192Q8IY95 271 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 MDM1Q8TC05 714 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 PARD3BQ8TEW8 1205 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 MFSD14AQ96MC6 490 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 CEP72Q9P209 647 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 OGDHLQ9ULD0 1010 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 SIP14410 1827 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 M0QZ92 97 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 KCNK3O14649 394 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 MAPK13O15264 365 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 FAM189A1O60320 539 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 KIF4AO95239 1232 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 SLC9A1P19634 815 aa14.56□□□□□ -0.08
COPS7B-221ENST00000488111 HOXA11P31270 313 aaPredicted RBP14.56□□□□□ -0.08
COPS7B-221ENST00000488111 FMO5P49326 533 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms