RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PLIN2Q99541 437 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 KCND2Q9NZV8 630 aa21.11■□□□□ 0.97
SMPDL3A-202ENST00000487215 NUP210Q8TEM1 1887 aaPredicted RBP21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 H0YCG3 227 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 PLA2G4BP0C869 781 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 ODC1P11926 461 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 LIG4P49917 911 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 LILRA4P59901 499 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 CYP4F8P98187 520 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 KYAT1Q16773 422 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 ST3GAL2Q16842 350 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 SPATA1Q5VX52 437 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 ARMCX5Q6P1M9 558 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 ITIH5Q86UX2 942 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 SYNPOQ8N3V7 929 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 KCTD17Q8N5Z5 321 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 OR10T2Q8NGX3 314 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 BPIFB1Q8TDL5 484 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 KCNN1Q92952 543 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 SENP8Q96LD8 212 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 ZSCAN31Q96LW9 406 aaPredicted RBP21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 LPIN3Q9BQK8 851 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 TASP1Q9H6P5 420 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 RPF1Q9H9Y2 349 aaKnown RBP21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 LARSQ9P2J5 1176 aaKnown RBP21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 HSFX1Q9UBD0 423 aa21.1■□□□□ 0.97
SMPDL3A-202ENST00000487215 OGTO15294 1046 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 FOXD2O60548 495 aaPredicted RBP21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 ADRB2P07550 413 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 WEE1P30291 646 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 PLCB2Q00722 1185 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 ARSHQ5FYA8 562 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 TSPAN18Q96SJ8 248 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 SEPT5Q99719 369 aaPredicted RBP21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 IL21Q9HBE4 155 aa21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 SH2B1Q9NRF2 756 aaPredicted RBP21.09■□□□□ 0.97
SMPDL3A-202ENST00000487215 TSC2P49815 1807 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 HNRNPDLO14979 420 aaKnown RBP21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 ATF6P18850 670 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 TMEM119Q4V9L6 283 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 JADE1Q6IE81 842 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 PKN3Q6P5Z2 889 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 FAM212AQ96EL1 285 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 SMG9Q9H0W8 520 aaKnown RBP21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 TBX20Q9UMR3 447 aa21.08■□□□□ 0.97
SMPDL3A-202ENST00000487215 EXTL3O43909 919 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 PIGRP01833 764 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 NFICP08651 508 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 KCNA4P22459 653 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 TUFMP49411 452 aaKnown RBP21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 MCM2P49736 904 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 CDR1P51861 262 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 VEPH1Q14D04 833 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 ITPRIPL2Q3MIP1 535 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 MGAT5BQ3V5L5 792 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 SLC39A12Q504Y0 691 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 C9orf57Q5W0N0 161 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 CDK5RAP3Q96JB5 506 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 ZCWPW1Q9H0M4 648 aa21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 CPSF3Q9UKF6 684 aaKnown RBP21.07■□□□□ 0.96
SMPDL3A-202ENST00000487215 MYH11P35749 1972 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 A0A0B4J269 797 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 VWA3AA6NCI4 1184 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 PIRO00625 290 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 AXIN1O15169 862 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 CYP11A1P05108 521 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 PAX3P23760 479 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 CDC25CP30307 473 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 PXNP49023 591 aaPredicted RBP21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 SF3A2Q15428 464 aaKnown RBP21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 AASDHQ4L235 1098 aaPredicted RBP21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 CD302Q8IX05 232 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 DDX1Q92499 740 aaKnown RBP21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 GCNAQ96QF7 691 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 REEP2Q9BRK0 252 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 MSTO1Q9BUK6 570 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 SLC46A2Q9BY10 475 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 ARRDC1-AS1Q9H2J1 176 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 THG1LQ9NWX6 298 aaKnown RBP21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 ODF2LQ9ULJ1 636 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 ZFHX4Q86UP3 3567 aa21.06■□□□□ 0.96
SMPDL3A-202ENST00000487215 ANO9A1A5B4 782 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 K7ENM7 598 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 LIMK1P53667 647 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 CCDC6Q16204 474 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 RILPL1Q5EBL4 403 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 IL31Q6EBC2 164 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 SLC39A4Q6P5W5 647 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 GIPC2Q8TF65 315 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 GAB3Q8WWW8 586 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 CHAMP1Q96JM3 812 aa21.05■□□□□ 0.96
SMPDL3A-202ENST00000487215 RPP40O75818 363 aaKnown RBP21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 TMEM132DQ14C87 1099 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 TMEM196Q5HYL7 178 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 MCTP1Q6DN14 999 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 FSTL4Q6MZW2 842 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 C12orf50Q8NA57 414 aaPredicted RBP21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 CHFRQ96EP1 664 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 LOXL4Q96JB6 756 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms