RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 BRAFP15056 766 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 MAGEA4P43358 317 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 LMNB2Q03252 620 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 TMEM63BQ5T3F8 832 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 GPAT2Q6NUI2 795 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 RIOX2Q8IUF8 465 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 FUKQ8N0W3 1084 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 NIF3L1Q9GZT8 377 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 HAUS2Q9NVX0 235 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 TBK1Q9UHD2 729 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 CPSF3Q9UKF6 684 aaKnown RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 OGTO15294 1046 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 CDH16O75309 829 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 OAS1P00973 400 aaKnown RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 MCL1Q07820 350 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 XRCC4Q13426 336 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 STAT4Q14765 748 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 LY6KQ17RY6 165 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 IER5Q5VY09 327 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 METTL7BQ6UX53 244 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 SPOCD1Q6ZMY3 1216 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 TAX1BP1Q86VP1 789 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ALLCQ8N6M5 410 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 CKAP2Q8WWK9 683 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ZNF518BQ9C0D4 1074 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 NSRP1Q9H0G5 558 aaKnown RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ZNF148Q9UQR1 794 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 DNALI1O14645 258 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 DNAJC8O75937 253 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 GH1P01241 217 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 HOXC6P09630 235 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 TGFB3P10600 412 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ETS1P14921 441 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 DCUN1D2Q6PH85 259 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 FGFR1OP2Q9NVK5 253 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 SLC12A4Q9UP95 1085 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 DRG1Q9Y295 367 aaKnown RBP13.03□□□□□ -0.32
PTCD2-204ENST00000486995 SNCAIPQ9Y6H5 919 aa13.03□□□□□ -0.32
PTCD2-204ENST00000486995 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 ZBTB42B2RXF5 422 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 PRKCBP05771 671 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 ABHD2P08910 425 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.32
PTCD2-204ENST00000486995 MARK3P27448 753 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 MNAT1P51948 309 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 COPS2P61201 443 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.32
PTCD2-204ENST00000486995 TRPM8Q7Z2W7 1104 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 CCDC77Q9BR77 488 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.32
PTCD2-204ENST00000486995 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.32
PTCD2-204ENST00000486995 PTPN7P35236 360 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CDKN2BP42772 138 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 ASPAP45381 313 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 ARSEP51690 589 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
PTCD2-204ENST00000486995 TRPC3Q13507 836 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 VGLL4Q14135 290 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CCDC142Q17RM4 750 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CYP4A22Q5TCH4 519 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CYB5D1Q6P9G0 228 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 ERICH1Q86X53 443 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 NCAPG2Q86XI2 1143 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 NIPA2Q8N8Q9 360 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 MAML1Q92585 1016 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
PTCD2-204ENST00000486995 IGKV6-21A0A0C4DH24 114 aa13.01□□□□□ -0.33
PTCD2-204ENST00000486995 ARIH2O95376 493 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms